Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
RFX1P22670 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
RFX1P22670 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RFX1P22670 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC18.56■□□□□ 0.56
RFX1P22670 RBSN-204ENST00000449050 903 ntTSL 2 BASIC18.56■□□□□ 0.56
RFX1P22670 RNA5SP415-201ENST00000517246 115 ntBASIC18.56■□□□□ 0.56
RFX1P22670 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC18.56■□□□□ 0.56
RFX1P22670 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
RFX1P22670 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC18.56■□□□□ 0.56
RFX1P22670 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC18.56■□□□□ 0.56
RFX1P22670 AC002347.1-201ENST00000569543 541 ntBASIC18.56■□□□□ 0.56
RFX1P22670 PNMT-203ENST00000581428 677 ntTSL 2 BASIC18.56■□□□□ 0.56
RFX1P22670 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC18.56■□□□□ 0.56
RFX1P22670 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC18.56■□□□□ 0.56
RFX1P22670 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC18.56■□□□□ 0.56
RFX1P22670 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
RFX1P22670 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
RFX1P22670 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
RFX1P22670 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
RFX1P22670 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
RFX1P22670 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
RFX1P22670 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
RFX1P22670 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
RFX1P22670 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RFX1P22670 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RFX1P22670 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RFX1P22670 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RFX1P22670 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
RFX1P22670 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC18.55■□□□□ 0.56
RFX1P22670 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RFX1P22670 AL356309.3-201ENST00000624132 1934 ntBASIC18.55■□□□□ 0.56
RFX1P22670 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RFX1P22670 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RFX1P22670 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC18.55■□□□□ 0.56
RFX1P22670 AC011676.5-201ENST00000624864 2660 ntBASIC18.55■□□□□ 0.56
RFX1P22670 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RFX1P22670 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
RFX1P22670 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RFX1P22670 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RFX1P22670 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RFX1P22670 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RFX1P22670 BEX3-201ENST00000361298 921 ntTSL 2 BASIC18.55■□□□□ 0.56
RFX1P22670 FIS1-203ENST00000442303 631 ntTSL 3 BASIC18.55■□□□□ 0.56
RFX1P22670 AC112482.1-201ENST00000492080 688 ntBASIC18.55■□□□□ 0.56
RFX1P22670 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC18.55■□□□□ 0.56
RFX1P22670 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC18.55■□□□□ 0.56
RFX1P22670 AC034105.1-201ENST00000563488 319 ntBASIC18.55■□□□□ 0.56
RFX1P22670 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC18.55■□□□□ 0.56
RFX1P22670 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RFX1P22670 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RFX1P22670 AC148477.5-201ENST00000625164 1645 ntBASIC18.55■□□□□ 0.56
RFX1P22670 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
RFX1P22670 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC18.55■□□□□ 0.56
RFX1P22670 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC18.55■□□□□ 0.56
RFX1P22670 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RFX1P22670 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RFX1P22670 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
RFX1P22670 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC18.55■□□□□ 0.56
RFX1P22670 FRMD8P1-201ENST00000440433 1524 ntBASIC18.54■□□□□ 0.56
RFX1P22670 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
RFX1P22670 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
RFX1P22670 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC18.54■□□□□ 0.56
RFX1P22670 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RFX1P22670 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC18.54■□□□□ 0.56
RFX1P22670 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC18.54■□□□□ 0.56
RFX1P22670 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
RFX1P22670 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC18.54■□□□□ 0.56
RFX1P22670 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RFX1P22670 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RFX1P22670 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC18.54■□□□□ 0.56
RFX1P22670 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
RFX1P22670 AC079776.2-201ENST00000641154 1609 ntBASIC18.54■□□□□ 0.56
RFX1P22670 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RFX1P22670 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RFX1P22670 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RFX1P22670 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC18.54■□□□□ 0.56
RFX1P22670 LBH-204ENST00000406087 559 ntTSL 4 BASIC18.54■□□□□ 0.56
RFX1P22670 S100A2-206ENST00000497140 697 ntTSL 2 BASIC18.54■□□□□ 0.56
RFX1P22670 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC18.54■□□□□ 0.56
RFX1P22670 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC18.54■□□□□ 0.56
RFX1P22670 SART3-203ENST00000546611 1184 ntBASIC18.54■□□□□ 0.56
RFX1P22670 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC18.54■□□□□ 0.56
RFX1P22670 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC18.54■□□□□ 0.56
RFX1P22670 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RFX1P22670 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC18.54■□□□□ 0.56
RFX1P22670 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
RFX1P22670 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
RFX1P22670 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
RFX1P22670 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC18.54■□□□□ 0.56
RFX1P22670 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC18.54■□□□□ 0.56
RFX1P22670 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RFX1P22670 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
RFX1P22670 OS9-205ENST00000413095 1660 ntTSL 2 BASIC18.54■□□□□ 0.56
RFX1P22670 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
RFX1P22670 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC18.53■□□□□ 0.56
RFX1P22670 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
RFX1P22670 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
RFX1P22670 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RFX1P22670 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
RFX1P22670 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms