Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
ERCC3P19447 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC19.7■□□□□ 0.74
ERCC3P19447 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC19.7■□□□□ 0.74
ERCC3P19447 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC19.7■□□□□ 0.74
ERCC3P19447 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC19.7■□□□□ 0.74
ERCC3P19447 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
ERCC3P19447 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
ERCC3P19447 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC19.7■□□□□ 0.74
ERCC3P19447 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
ERCC3P19447 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
ERCC3P19447 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ERCC3P19447 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
ERCC3P19447 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
ERCC3P19447 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ERCC3P19447 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ERCC3P19447 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
ERCC3P19447 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
ERCC3P19447 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
ERCC3P19447 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
ERCC3P19447 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC19.69■□□□□ 0.74
ERCC3P19447 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ERCC3P19447 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
ERCC3P19447 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC19.69■□□□□ 0.74
ERCC3P19447 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC19.69■□□□□ 0.74
ERCC3P19447 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC19.69■□□□□ 0.74
ERCC3P19447 FAM8A3P-201ENST00000427218 844 ntBASIC19.69■□□□□ 0.74
ERCC3P19447 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC19.69■□□□□ 0.74
ERCC3P19447 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC19.69■□□□□ 0.74
ERCC3P19447 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
ERCC3P19447 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC19.69■□□□□ 0.74
ERCC3P19447 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC19.69■□□□□ 0.74
ERCC3P19447 AC112191.1-201ENST00000523689 701 ntBASIC19.69■□□□□ 0.74
ERCC3P19447 RPL28-209ENST00000560055 670 ntTSL 3 BASIC19.69■□□□□ 0.74
ERCC3P19447 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC19.69■□□□□ 0.74
ERCC3P19447 AC092364.2-202ENST00000597012 1073 ntBASIC19.69■□□□□ 0.74
ERCC3P19447 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
ERCC3P19447 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC19.69■□□□□ 0.74
ERCC3P19447 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC19.69■□□□□ 0.74
ERCC3P19447 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC19.69■□□□□ 0.74
ERCC3P19447 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC19.69■□□□□ 0.74
ERCC3P19447 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC19.69■□□□□ 0.74
ERCC3P19447 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC19.69■□□□□ 0.74
ERCC3P19447 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC19.69■□□□□ 0.74
ERCC3P19447 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ERCC3P19447 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ERCC3P19447 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC19.69■□□□□ 0.74
ERCC3P19447 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
ERCC3P19447 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC19.68■□□□□ 0.74
ERCC3P19447 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ERCC3P19447 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC19.68■□□□□ 0.74
ERCC3P19447 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ERCC3P19447 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC19.68■□□□□ 0.74
ERCC3P19447 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
ERCC3P19447 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ERCC3P19447 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC19.68■□□□□ 0.74
ERCC3P19447 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
ERCC3P19447 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
ERCC3P19447 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC19.68■□□□□ 0.74
ERCC3P19447 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC19.68■□□□□ 0.74
ERCC3P19447 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
ERCC3P19447 HLA-J-203ENST00000494367 1087 ntBASIC19.68■□□□□ 0.74
ERCC3P19447 NMU-203ENST00000507338 658 ntTSL 3 BASIC19.68■□□□□ 0.74
ERCC3P19447 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC19.68■□□□□ 0.74
ERCC3P19447 RPL28-205ENST00000558131 444 ntTSL 5 BASIC19.68■□□□□ 0.74
ERCC3P19447 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC19.68■□□□□ 0.74
ERCC3P19447 IGHV3OR16-6-201ENST00000568775 360 ntBASIC19.68■□□□□ 0.74
ERCC3P19447 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC19.68■□□□□ 0.74
ERCC3P19447 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
ERCC3P19447 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ERCC3P19447 AC129492.6-201ENST00000611383 1305 ntBASIC19.68■□□□□ 0.74
ERCC3P19447 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC19.68■□□□□ 0.74
ERCC3P19447 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
ERCC3P19447 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ERCC3P19447 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ERCC3P19447 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ERCC3P19447 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ERCC3P19447 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ERCC3P19447 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
ERCC3P19447 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
ERCC3P19447 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
ERCC3P19447 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC19.68■□□□□ 0.74
ERCC3P19447 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ERCC3P19447 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
ERCC3P19447 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC19.67■□□□□ 0.74
ERCC3P19447 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC19.67■□□□□ 0.74
ERCC3P19447 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC19.67■□□□□ 0.74
ERCC3P19447 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC19.67■□□□□ 0.74
ERCC3P19447 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
ERCC3P19447 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC19.67■□□□□ 0.74
ERCC3P19447 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ERCC3P19447 CBR1-202ENST00000399191 838 ntTSL 3 BASIC19.67■□□□□ 0.74
ERCC3P19447 ADH5P3-201ENST00000433842 1137 ntBASIC19.67■□□□□ 0.74
ERCC3P19447 DAD1-205ENST00000543337 501 ntTSL 3 BASIC19.67■□□□□ 0.74
ERCC3P19447 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC19.67■□□□□ 0.74
ERCC3P19447 AC011467.4-201ENST00000594891 528 ntBASIC19.67■□□□□ 0.74
ERCC3P19447 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
ERCC3P19447 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC19.67■□□□□ 0.74
ERCC3P19447 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
ERCC3P19447 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
ERCC3P19447 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC19.67■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms