Protein–RNA interactions for Protein: P13236

CCL4, C-C motif chemokine 4, humanhuman

Predictions only

Length 92 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL4P13236 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
CCL4P13236 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CCL4P13236 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
CCL4P13236 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC15.98■□□□□ 0.15
CCL4P13236 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
CCL4P13236 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CCL4P13236 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CCL4P13236 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CCL4P13236 AC008764.6-201ENST00000595909 2069 ntBASIC15.98■□□□□ 0.15
CCL4P13236 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
CCL4P13236 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
CCL4P13236 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CCL4P13236 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC15.98■□□□□ 0.15
CCL4P13236 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC15.97■□□□□ 0.15
CCL4P13236 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CCL4P13236 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC15.97■□□□□ 0.15
CCL4P13236 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC15.97■□□□□ 0.15
CCL4P13236 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC15.97■□□□□ 0.15
CCL4P13236 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CCL4P13236 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC15.97■□□□□ 0.15
CCL4P13236 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC15.97■□□□□ 0.15
CCL4P13236 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC15.97■□□□□ 0.15
CCL4P13236 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CCL4P13236 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
CCL4P13236 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CCL4P13236 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CCL4P13236 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CCL4P13236 MIR661-201ENST00000384842 89 ntBASIC15.97■□□□□ 0.15
CCL4P13236 AC002472.2-201ENST00000442739 958 ntBASIC15.97■□□□□ 0.15
CCL4P13236 TSPY16P-201ENST00000449843 468 ntBASIC15.97■□□□□ 0.15
CCL4P13236 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CCL4P13236 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CCL4P13236 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC15.97■□□□□ 0.15
CCL4P13236 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC15.97■□□□□ 0.15
CCL4P13236 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CCL4P13236 AL138918.1-201ENST00000568306 659 ntBASIC15.97■□□□□ 0.15
CCL4P13236 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CCL4P13236 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC15.97■□□□□ 0.15
CCL4P13236 AP001350.2-201ENST00000625104 1094 ntBASIC15.97■□□□□ 0.15
CCL4P13236 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC15.97■□□□□ 0.15
CCL4P13236 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CCL4P13236 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CCL4P13236 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CCL4P13236 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
CCL4P13236 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CCL4P13236 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC15.97■□□□□ 0.15
CCL4P13236 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
CCL4P13236 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC15.97■□□□□ 0.15
CCL4P13236 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC15.97■□□□□ 0.15
CCL4P13236 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
CCL4P13236 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
CCL4P13236 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC15.97■□□□□ 0.15
CCL4P13236 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC15.96■□□□□ 0.15
CCL4P13236 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
CCL4P13236 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CCL4P13236 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
CCL4P13236 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
CCL4P13236 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CCL4P13236 AC016396.2-201ENST00000562575 1417 ntBASIC15.96■□□□□ 0.15
CCL4P13236 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CCL4P13236 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
CCL4P13236 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
CCL4P13236 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC15.96■□□□□ 0.15
CCL4P13236 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CCL4P13236 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CCL4P13236 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CCL4P13236 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CCL4P13236 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CCL4P13236 MIR346-201ENST00000362234 95 ntBASIC15.96■□□□□ 0.15
CCL4P13236 CD81-202ENST00000381036 880 ntTSL 3 BASIC15.96■□□□□ 0.15
CCL4P13236 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
CCL4P13236 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CCL4P13236 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC15.96■□□□□ 0.15
CCL4P13236 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC15.96■□□□□ 0.15
CCL4P13236 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC15.96■□□□□ 0.15
CCL4P13236 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
CCL4P13236 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC15.96■□□□□ 0.15
CCL4P13236 PPP6R2P1-201ENST00000450880 1275 ntBASIC15.96■□□□□ 0.15
CCL4P13236 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CCL4P13236 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC15.96■□□□□ 0.15
CCL4P13236 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC15.96■□□□□ 0.15
CCL4P13236 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.15
CCL4P13236 RN7SL204P-201ENST00000582831 262 ntBASIC15.96■□□□□ 0.15
CCL4P13236 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CCL4P13236 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC15.96■□□□□ 0.15
CCL4P13236 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CCL4P13236 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CCL4P13236 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
CCL4P13236 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC15.96■□□□□ 0.15
CCL4P13236 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CCL4P13236 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC15.96■□□□□ 0.15
CCL4P13236 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CCL4P13236 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
CCL4P13236 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
CCL4P13236 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
CCL4P13236 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.14
CCL4P13236 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC15.96■□□□□ 0.14
CCL4P13236 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
CCL4P13236 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
CCL4P13236 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms