Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
RAB40ALP0C0E4 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC16.04■□□□□ 0.16
RAB40ALP0C0E4 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC16.04■□□□□ 0.16
RAB40ALP0C0E4 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC16.04■□□□□ 0.16
RAB40ALP0C0E4 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC16.04■□□□□ 0.16
RAB40ALP0C0E4 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RAB40ALP0C0E4 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RAB40ALP0C0E4 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RAB40ALP0C0E4 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC16.04■□□□□ 0.16
RAB40ALP0C0E4 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
RAB40ALP0C0E4 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC16.04■□□□□ 0.16
RAB40ALP0C0E4 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC16.04■□□□□ 0.16
RAB40ALP0C0E4 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RAB40ALP0C0E4 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
RAB40ALP0C0E4 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
RAB40ALP0C0E4 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
RAB40ALP0C0E4 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC16.04■□□□□ 0.16
RAB40ALP0C0E4 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC16.04■□□□□ 0.16
RAB40ALP0C0E4 STOM-202ENST00000347359 870 ntTSL 2 BASIC16.04■□□□□ 0.16
RAB40ALP0C0E4 AC002056.1-201ENST00000395613 760 ntBASIC16.04■□□□□ 0.16
RAB40ALP0C0E4 HMGN1P19-201ENST00000436976 333 ntBASIC16.04■□□□□ 0.16
RAB40ALP0C0E4 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
RAB40ALP0C0E4 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC16.04■□□□□ 0.16
RAB40ALP0C0E4 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC16.04■□□□□ 0.16
RAB40ALP0C0E4 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC16.04■□□□□ 0.16
RAB40ALP0C0E4 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RAB40ALP0C0E4 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
RAB40ALP0C0E4 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
RAB40ALP0C0E4 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
RAB40ALP0C0E4 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RAB40ALP0C0E4 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RAB40ALP0C0E4 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
RAB40ALP0C0E4 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
RAB40ALP0C0E4 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC16.03■□□□□ 0.16
RAB40ALP0C0E4 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RAB40ALP0C0E4 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC16.03■□□□□ 0.16
RAB40ALP0C0E4 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
RAB40ALP0C0E4 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
RAB40ALP0C0E4 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RAB40ALP0C0E4 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RAB40ALP0C0E4 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RAB40ALP0C0E4 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
RAB40ALP0C0E4 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC16.03■□□□□ 0.16
RAB40ALP0C0E4 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC16.03■□□□□ 0.16
RAB40ALP0C0E4 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
RAB40ALP0C0E4 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
RAB40ALP0C0E4 RPL28-209ENST00000560055 670 ntTSL 3 BASIC16.03■□□□□ 0.16
RAB40ALP0C0E4 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
RAB40ALP0C0E4 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC16.03■□□□□ 0.16
RAB40ALP0C0E4 AC004835.2-201ENST00000603762 682 ntBASIC16.03■□□□□ 0.16
RAB40ALP0C0E4 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC16.03■□□□□ 0.16
RAB40ALP0C0E4 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC16.03■□□□□ 0.16
RAB40ALP0C0E4 AL513210.1-201ENST00000629608 234 ntBASIC16.03■□□□□ 0.16
RAB40ALP0C0E4 AL121761.2-201ENST00000598007 1648 ntBASIC16.03■□□□□ 0.16
RAB40ALP0C0E4 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RAB40ALP0C0E4 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
RAB40ALP0C0E4 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RAB40ALP0C0E4 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
RAB40ALP0C0E4 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
RAB40ALP0C0E4 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RAB40ALP0C0E4 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
RAB40ALP0C0E4 AL645608.8-201ENST00000606034 2086 ntBASIC16.03■□□□□ 0.16
RAB40ALP0C0E4 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RAB40ALP0C0E4 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC16.02■□□□□ 0.16
RAB40ALP0C0E4 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
RAB40ALP0C0E4 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
RAB40ALP0C0E4 AC133963.1-201ENST00000504166 1679 ntBASIC16.02■□□□□ 0.16
RAB40ALP0C0E4 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
RAB40ALP0C0E4 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
RAB40ALP0C0E4 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
RAB40ALP0C0E4 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.16
RAB40ALP0C0E4 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
RAB40ALP0C0E4 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
RAB40ALP0C0E4 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
RAB40ALP0C0E4 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
RAB40ALP0C0E4 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
RAB40ALP0C0E4 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
RAB40ALP0C0E4 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC16.02■□□□□ 0.16
RAB40ALP0C0E4 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
RAB40ALP0C0E4 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC16.02■□□□□ 0.16
RAB40ALP0C0E4 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC16.02■□□□□ 0.16
RAB40ALP0C0E4 AL645939.2-201ENST00000427340 991 ntBASIC16.02■□□□□ 0.16
RAB40ALP0C0E4 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
RAB40ALP0C0E4 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC16.02■□□□□ 0.16
RAB40ALP0C0E4 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC16.02■□□□□ 0.16
RAB40ALP0C0E4 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
RAB40ALP0C0E4 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC16.02■□□□□ 0.16
RAB40ALP0C0E4 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
RAB40ALP0C0E4 AC105339.1-204ENST00000636249 355 ntBASIC16.02■□□□□ 0.16
RAB40ALP0C0E4 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC16.02■□□□□ 0.16
RAB40ALP0C0E4 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
RAB40ALP0C0E4 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
RAB40ALP0C0E4 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
RAB40ALP0C0E4 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
RAB40ALP0C0E4 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
RAB40ALP0C0E4 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC16.02■□□□□ 0.15
RAB40ALP0C0E4 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
RAB40ALP0C0E4 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
RAB40ALP0C0E4 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC16.02■□□□□ 0.15
RAB40ALP0C0E4 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms