Protein–RNA interactions for Protein: P04628

WNT1, Proto-oncogene Wnt-1, humanhuman

Predictions only

Length 370 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WNT1P04628 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC16.64■□□□□ 0.25
WNT1P04628 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC16.64■□□□□ 0.25
WNT1P04628 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
WNT1P04628 IGHV3-62-201ENST00000520057 340 ntBASIC16.64■□□□□ 0.25
WNT1P04628 AC026150.2-201ENST00000564693 1156 ntBASIC16.64■□□□□ 0.25
WNT1P04628 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC16.64■□□□□ 0.25
WNT1P04628 AC138761.1-201ENST00000584393 385 ntBASIC16.64■□□□□ 0.25
WNT1P04628 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
WNT1P04628 AC138649.4-201ENST00000612222 287 ntBASIC16.64■□□□□ 0.25
WNT1P04628 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC16.64■□□□□ 0.25
WNT1P04628 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
WNT1P04628 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
WNT1P04628 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
WNT1P04628 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC16.64■□□□□ 0.25
WNT1P04628 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
WNT1P04628 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC16.64■□□□□ 0.25
WNT1P04628 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
WNT1P04628 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
WNT1P04628 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
WNT1P04628 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
WNT1P04628 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
WNT1P04628 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
WNT1P04628 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
WNT1P04628 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
WNT1P04628 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
WNT1P04628 RNU1-129P-201ENST00000384064 167 ntBASIC16.63■□□□□ 0.25
WNT1P04628 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC16.63■□□□□ 0.25
WNT1P04628 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC16.63■□□□□ 0.25
WNT1P04628 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC16.63■□□□□ 0.25
WNT1P04628 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC16.63■□□□□ 0.25
WNT1P04628 SPDYE14P-201ENST00000442619 822 ntBASIC16.63■□□□□ 0.25
WNT1P04628 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
WNT1P04628 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
WNT1P04628 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC16.63■□□□□ 0.25
WNT1P04628 U1.21-201ENST00000580816 167 ntBASIC16.63■□□□□ 0.25
WNT1P04628 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
WNT1P04628 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
WNT1P04628 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
WNT1P04628 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
WNT1P04628 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
WNT1P04628 AC084121.4-201ENST00000641598 221 ntBASIC16.63■□□□□ 0.25
WNT1P04628 AF228730.8-201ENST00000642140 221 ntBASIC16.63■□□□□ 0.25
WNT1P04628 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC16.63■□□□□ 0.25
WNT1P04628 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC16.63■□□□□ 0.25
WNT1P04628 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
WNT1P04628 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
WNT1P04628 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC16.63■□□□□ 0.25
WNT1P04628 AC008677.1-201ENST00000519230 1561 ntBASIC16.63■□□□□ 0.25
WNT1P04628 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC16.63■□□□□ 0.25
WNT1P04628 AC067852.2-201ENST00000590513 2313 ntBASIC16.63■□□□□ 0.25
WNT1P04628 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
WNT1P04628 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
WNT1P04628 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
WNT1P04628 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
WNT1P04628 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
WNT1P04628 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
WNT1P04628 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
WNT1P04628 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC16.62■□□□□ 0.25
WNT1P04628 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
WNT1P04628 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
WNT1P04628 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
WNT1P04628 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
WNT1P04628 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
WNT1P04628 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
WNT1P04628 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
WNT1P04628 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
WNT1P04628 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC16.62■□□□□ 0.25
WNT1P04628 MIR943-201ENST00000401286 94 ntBASIC16.62■□□□□ 0.25
WNT1P04628 HCG4-201ENST00000418983 998 ntBASIC16.62■□□□□ 0.25
WNT1P04628 KLF2P3-201ENST00000451977 1087 ntBASIC16.62■□□□□ 0.25
WNT1P04628 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
WNT1P04628 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
WNT1P04628 MTRF1LP2-201ENST00000506027 1122 ntBASIC16.62■□□□□ 0.25
WNT1P04628 CFL1-212ENST00000531413 636 ntTSL 3 BASIC16.62■□□□□ 0.25
WNT1P04628 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC16.62■□□□□ 0.25
WNT1P04628 KRT8P23-201ENST00000560090 1207 ntBASIC16.62■□□□□ 0.25
WNT1P04628 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC16.62■□□□□ 0.25
WNT1P04628 WT1-AS_2.1-201ENST00000613208 137 ntBASIC16.62■□□□□ 0.25
WNT1P04628 AJ011932.1-201ENST00000621707 465 ntBASIC16.62■□□□□ 0.25
WNT1P04628 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC16.62■□□□□ 0.25
WNT1P04628 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC16.62■□□□□ 0.25
WNT1P04628 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
WNT1P04628 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
WNT1P04628 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
WNT1P04628 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC16.62■□□□□ 0.25
WNT1P04628 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC16.62■□□□□ 0.25
WNT1P04628 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC16.62■□□□□ 0.25
WNT1P04628 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC16.62■□□□□ 0.25
WNT1P04628 TOP3BP1-201ENST00000420768 1380 ntBASIC16.62■□□□□ 0.25
WNT1P04628 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
WNT1P04628 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC16.62■□□□□ 0.25
WNT1P04628 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC16.62■□□□□ 0.25
WNT1P04628 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC16.62■□□□□ 0.25
WNT1P04628 WASH6P-202ENST00000359512 1437 ntBASIC16.62■□□□□ 0.25
WNT1P04628 HARS-204ENST00000438307 1789 ntTSL 2 BASIC16.61■□□□□ 0.25
WNT1P04628 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
WNT1P04628 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
WNT1P04628 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
WNT1P04628 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
WNT1P04628 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC16.61■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms