Protein–RNA interactions for Protein: P04035

HMGCR, 3-hydroxy-3-methylglutaryl-coenzyme A reductase, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCRP04035 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
HMGCRP04035 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC19.1■□□□□ 0.65
HMGCRP04035 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
HMGCRP04035 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
HMGCRP04035 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
HMGCRP04035 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC19.09■□□□□ 0.65
HMGCRP04035 AC018470.1-201ENST00000624790 3129 ntBASIC19.09■□□□□ 0.65
HMGCRP04035 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC19.09■□□□□ 0.65
HMGCRP04035 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
HMGCRP04035 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC19.09■□□□□ 0.65
HMGCRP04035 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
HMGCRP04035 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
HMGCRP04035 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
HMGCRP04035 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
HMGCRP04035 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
HMGCRP04035 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
HMGCRP04035 GRAMD4P3-201ENST00000621665 1669 ntBASIC19.09■□□□□ 0.65
HMGCRP04035 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
HMGCRP04035 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
HMGCRP04035 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC19.09■□□□□ 0.65
HMGCRP04035 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
HMGCRP04035 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
HMGCRP04035 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
HMGCRP04035 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
HMGCRP04035 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC19.09■□□□□ 0.65
HMGCRP04035 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC19.09■□□□□ 0.65
HMGCRP04035 LY6E-204ENST00000519546 971 ntTSL 2 BASIC19.09■□□□□ 0.65
HMGCRP04035 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
HMGCRP04035 MIR3909-201ENST00000579518 119 ntBASIC19.09■□□□□ 0.65
HMGCRP04035 SPDYE12P-201ENST00000618416 771 ntBASIC19.09■□□□□ 0.65
HMGCRP04035 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
HMGCRP04035 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC19.09■□□□□ 0.65
HMGCRP04035 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
HMGCRP04035 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
HMGCRP04035 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC19.09■□□□□ 0.65
HMGCRP04035 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC19.09■□□□□ 0.65
HMGCRP04035 PXK-206ENST00000463280 2825 ntTSL 2 BASIC19.09■□□□□ 0.65
HMGCRP04035 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
HMGCRP04035 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC19.09■□□□□ 0.65
HMGCRP04035 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
HMGCRP04035 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
HMGCRP04035 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC19.08■□□□□ 0.65
HMGCRP04035 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC19.08■□□□□ 0.65
HMGCRP04035 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
HMGCRP04035 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC19.08■□□□□ 0.65
HMGCRP04035 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
HMGCRP04035 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
HMGCRP04035 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
HMGCRP04035 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
HMGCRP04035 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC19.08■□□□□ 0.65
HMGCRP04035 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC19.08■□□□□ 0.65
HMGCRP04035 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
HMGCRP04035 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
HMGCRP04035 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
HMGCRP04035 HNRNPA3P1-201ENST00000401429 1139 ntBASIC19.08■□□□□ 0.64
HMGCRP04035 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
HMGCRP04035 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
HMGCRP04035 HNRNPA3P5-201ENST00000455201 833 ntBASIC19.08■□□□□ 0.64
HMGCRP04035 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC19.08■□□□□ 0.64
HMGCRP04035 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
HMGCRP04035 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
HMGCRP04035 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC19.08■□□□□ 0.64
HMGCRP04035 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC19.08■□□□□ 0.64
HMGCRP04035 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.64
HMGCRP04035 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
HMGCRP04035 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
HMGCRP04035 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC19.08■□□□□ 0.64
HMGCRP04035 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC19.07■□□□□ 0.64
HMGCRP04035 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
HMGCRP04035 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
HMGCRP04035 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
HMGCRP04035 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
HMGCRP04035 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
HMGCRP04035 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC19.07■□□□□ 0.64
HMGCRP04035 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
HMGCRP04035 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
HMGCRP04035 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
HMGCRP04035 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
HMGCRP04035 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
HMGCRP04035 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
HMGCRP04035 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
HMGCRP04035 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC19.07■□□□□ 0.64
HMGCRP04035 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC19.07■□□□□ 0.64
HMGCRP04035 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC19.07■□□□□ 0.64
HMGCRP04035 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC19.07■□□□□ 0.64
HMGCRP04035 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC19.07■□□□□ 0.64
HMGCRP04035 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
HMGCRP04035 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC19.07■□□□□ 0.64
HMGCRP04035 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC19.07■□□□□ 0.64
HMGCRP04035 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC19.07■□□□□ 0.64
HMGCRP04035 NKG7-205ENST00000600427 520 ntTSL 3 BASIC19.07■□□□□ 0.64
HMGCRP04035 AC018529.1-201ENST00000613063 361 ntBASIC19.07■□□□□ 0.64
HMGCRP04035 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC19.07■□□□□ 0.64
HMGCRP04035 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
HMGCRP04035 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC19.07■□□□□ 0.64
HMGCRP04035 HLA-DQB1-201ENST00000374943 1656 ntBASIC19.07■□□□□ 0.64
HMGCRP04035 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC19.07■□□□□ 0.64
HMGCRP04035 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
HMGCRP04035 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
HMGCRP04035 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms