Protein–RNA interactions for Protein: P02656

APOC3, Apolipoprotein C-III, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC3P02656 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC13.68□□□□□ -0.22
APOC3P02656 CARHSP1-220ENST00000619881 2849 ntAPPRIS P1 TSL 3 BASIC13.68□□□□□ -0.22
APOC3P02656 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
APOC3P02656 WARS-232ENST00000556645 2508 ntTSL 5 BASIC13.68□□□□□ -0.22
APOC3P02656 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC13.68□□□□□ -0.22
APOC3P02656 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC13.68□□□□□ -0.22
APOC3P02656 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
APOC3P02656 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
APOC3P02656 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
APOC3P02656 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
APOC3P02656 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
APOC3P02656 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
APOC3P02656 AC006486.2-201ENST00000624246 2199 ntBASIC13.68□□□□□ -0.22
APOC3P02656 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
APOC3P02656 DENND3-211ENST00000519811 5482 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
APOC3P02656 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC13.68□□□□□ -0.22
APOC3P02656 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
APOC3P02656 GCK-202ENST00000345378 2421 ntTSL 2 BASIC13.68□□□□□ -0.22
APOC3P02656 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC13.68□□□□□ -0.22
APOC3P02656 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
APOC3P02656 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
APOC3P02656 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
APOC3P02656 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
APOC3P02656 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
APOC3P02656 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
APOC3P02656 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC13.68□□□□□ -0.22
APOC3P02656 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
APOC3P02656 AL354811.1-201ENST00000610286 706 ntBASIC13.68□□□□□ -0.22
APOC3P02656 AC116407.2-201ENST00000613639 860 ntBASIC13.68□□□□□ -0.22
APOC3P02656 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC13.68□□□□□ -0.22
APOC3P02656 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
APOC3P02656 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC13.68□□□□□ -0.22
APOC3P02656 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
APOC3P02656 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC13.68□□□□□ -0.22
APOC3P02656 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
APOC3P02656 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
APOC3P02656 AC009949.1-201ENST00000623048 1830 ntBASIC13.68□□□□□ -0.22
APOC3P02656 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
APOC3P02656 AC010327.5-201ENST00000586923 3061 ntBASIC13.68□□□□□ -0.22
APOC3P02656 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
APOC3P02656 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
APOC3P02656 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
APOC3P02656 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
APOC3P02656 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
APOC3P02656 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC13.68□□□□□ -0.22
APOC3P02656 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
APOC3P02656 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
APOC3P02656 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC13.68□□□□□ -0.22
APOC3P02656 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
APOC3P02656 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
APOC3P02656 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC13.68□□□□□ -0.22
APOC3P02656 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC13.68□□□□□ -0.22
APOC3P02656 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
APOC3P02656 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
APOC3P02656 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
APOC3P02656 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC13.67□□□□□ -0.22
APOC3P02656 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
APOC3P02656 AC093525.9-201ENST00000624961 1746 ntBASIC13.67□□□□□ -0.22
APOC3P02656 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC13.67□□□□□ -0.22
APOC3P02656 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC13.67□□□□□ -0.22
APOC3P02656 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
APOC3P02656 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
APOC3P02656 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC13.67□□□□□ -0.22
APOC3P02656 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
APOC3P02656 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
APOC3P02656 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC13.67□□□□□ -0.22
APOC3P02656 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
APOC3P02656 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC13.67□□□□□ -0.22
APOC3P02656 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
APOC3P02656 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
APOC3P02656 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
APOC3P02656 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
APOC3P02656 TERF1P5-201ENST00000477545 1207 ntBASIC13.67□□□□□ -0.22
APOC3P02656 RARRES2P4-201ENST00000514074 484 ntBASIC13.67□□□□□ -0.22
APOC3P02656 TESC-206ENST00000541210 936 ntTSL 3 BASIC13.67□□□□□ -0.22
APOC3P02656 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC13.67□□□□□ -0.22
APOC3P02656 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC13.67□□□□□ -0.22
APOC3P02656 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC13.67□□□□□ -0.22
APOC3P02656 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC13.67□□□□□ -0.22
APOC3P02656 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC13.67□□□□□ -0.22
APOC3P02656 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
APOC3P02656 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
APOC3P02656 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
APOC3P02656 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
APOC3P02656 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
APOC3P02656 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
APOC3P02656 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC13.67□□□□□ -0.22
APOC3P02656 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
APOC3P02656 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
APOC3P02656 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
APOC3P02656 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
APOC3P02656 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
APOC3P02656 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC13.67□□□□□ -0.22
APOC3P02656 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
APOC3P02656 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC13.67□□□□□ -0.22
APOC3P02656 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
APOC3P02656 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
APOC3P02656 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
APOC3P02656 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC13.67□□□□□ -0.22
APOC3P02656 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC13.67□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms