Protein–RNA interactions for Protein: P01906

HLA-DQA2, HLA class II histocompatibility antigen, DQ alpha 2 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA2P01906 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
HLA-DQA2P01906 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
HLA-DQA2P01906 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
HLA-DQA2P01906 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
HLA-DQA2P01906 TP73-AS1-210ENST00000637775 1455 ntBASIC15.34■□□□□ 0.05
HLA-DQA2P01906 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
HLA-DQA2P01906 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
HLA-DQA2P01906 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
HLA-DQA2P01906 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC15.34■□□□□ 0.05
HLA-DQA2P01906 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
HLA-DQA2P01906 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
HLA-DQA2P01906 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
HLA-DQA2P01906 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
HLA-DQA2P01906 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
HLA-DQA2P01906 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
HLA-DQA2P01906 EGFEM1P-202ENST00000431685 1563 ntBASIC15.34■□□□□ 0.05
HLA-DQA2P01906 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
HLA-DQA2P01906 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
HLA-DQA2P01906 SLC25A1P3-201ENST00000395415 828 ntBASIC15.34■□□□□ 0.05
HLA-DQA2P01906 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC15.34■□□□□ 0.05
HLA-DQA2P01906 LINC00265-3P-201ENST00000447588 903 ntBASIC15.34■□□□□ 0.05
HLA-DQA2P01906 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC15.34■□□□□ 0.05
HLA-DQA2P01906 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
HLA-DQA2P01906 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC15.34■□□□□ 0.05
HLA-DQA2P01906 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
HLA-DQA2P01906 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC15.34■□□□□ 0.05
HLA-DQA2P01906 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC15.34■□□□□ 0.05
HLA-DQA2P01906 AC011467.2-201ENST00000598425 242 ntBASIC15.34■□□□□ 0.05
HLA-DQA2P01906 DBP-204ENST00000599385 709 ntTSL 3 BASIC15.34■□□□□ 0.05
HLA-DQA2P01906 AL590326.2-201ENST00000625139 305 ntBASIC15.34■□□□□ 0.05
HLA-DQA2P01906 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
HLA-DQA2P01906 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
HLA-DQA2P01906 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
HLA-DQA2P01906 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC15.34■□□□□ 0.05
HLA-DQA2P01906 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
HLA-DQA2P01906 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
HLA-DQA2P01906 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
HLA-DQA2P01906 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
HLA-DQA2P01906 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC15.34■□□□□ 0.05
HLA-DQA2P01906 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC15.34■□□□□ 0.05
HLA-DQA2P01906 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC15.34■□□□□ 0.05
HLA-DQA2P01906 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
HLA-DQA2P01906 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC15.34■□□□□ 0.05
HLA-DQA2P01906 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC15.34■□□□□ 0.05
HLA-DQA2P01906 IER3-202ENST00000376377 1350 ntBASIC15.34■□□□□ 0.05
HLA-DQA2P01906 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
HLA-DQA2P01906 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
HLA-DQA2P01906 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
HLA-DQA2P01906 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
HLA-DQA2P01906 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
HLA-DQA2P01906 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.05
HLA-DQA2P01906 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
HLA-DQA2P01906 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC15.33■□□□□ 0.05
HLA-DQA2P01906 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
HLA-DQA2P01906 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC15.33■□□□□ 0.05
HLA-DQA2P01906 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
HLA-DQA2P01906 AL118508.1-201ENST00000613502 2345 ntBASIC15.33■□□□□ 0.05
HLA-DQA2P01906 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.05
HLA-DQA2P01906 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC15.33■□□□□ 0.04
HLA-DQA2P01906 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
HLA-DQA2P01906 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
HLA-DQA2P01906 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
HLA-DQA2P01906 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
HLA-DQA2P01906 AGGF1P2-201ENST00000426656 2106 ntBASIC15.33■□□□□ 0.04
HLA-DQA2P01906 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC15.33■□□□□ 0.04
HLA-DQA2P01906 TOB2P1-201ENST00000469761 992 ntBASIC15.33■□□□□ 0.04
HLA-DQA2P01906 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC15.33■□□□□ 0.04
HLA-DQA2P01906 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC15.33■□□□□ 0.04
HLA-DQA2P01906 AP005901.3-202ENST00000581653 237 ntBASIC15.33■□□□□ 0.04
HLA-DQA2P01906 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC15.33■□□□□ 0.04
HLA-DQA2P01906 AP002414.4-201ENST00000589764 1148 ntBASIC15.33■□□□□ 0.04
HLA-DQA2P01906 IL11-204ENST00000590625 1028 ntTSL 2 BASIC15.33■□□□□ 0.04
HLA-DQA2P01906 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC15.33■□□□□ 0.04
HLA-DQA2P01906 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
HLA-DQA2P01906 AC073592.5-201ENST00000624854 528 ntBASIC15.33■□□□□ 0.04
HLA-DQA2P01906 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
HLA-DQA2P01906 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
HLA-DQA2P01906 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
HLA-DQA2P01906 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
HLA-DQA2P01906 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
HLA-DQA2P01906 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
HLA-DQA2P01906 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC15.33■□□□□ 0.04
HLA-DQA2P01906 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
HLA-DQA2P01906 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
HLA-DQA2P01906 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
HLA-DQA2P01906 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
HLA-DQA2P01906 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC15.33■□□□□ 0.04
HLA-DQA2P01906 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
HLA-DQA2P01906 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC15.33■□□□□ 0.04
HLA-DQA2P01906 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
HLA-DQA2P01906 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
HLA-DQA2P01906 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
HLA-DQA2P01906 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC15.33■□□□□ 0.04
HLA-DQA2P01906 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
HLA-DQA2P01906 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
HLA-DQA2P01906 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
HLA-DQA2P01906 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
HLA-DQA2P01906 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC15.32■□□□□ 0.04
HLA-DQA2P01906 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
HLA-DQA2P01906 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC15.32■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms