Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
ALDH1A1P00352 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC19.22■□□□□ 0.67
ALDH1A1P00352 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ALDH1A1P00352 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ALDH1A1P00352 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
ALDH1A1P00352 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC19.21■□□□□ 0.67
ALDH1A1P00352 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC19.21■□□□□ 0.67
ALDH1A1P00352 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ALDH1A1P00352 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC19.21■□□□□ 0.67
ALDH1A1P00352 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
ALDH1A1P00352 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC19.21■□□□□ 0.67
ALDH1A1P00352 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
ALDH1A1P00352 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
ALDH1A1P00352 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
ALDH1A1P00352 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
ALDH1A1P00352 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
ALDH1A1P00352 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC19.21■□□□□ 0.67
ALDH1A1P00352 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC19.21■□□□□ 0.67
ALDH1A1P00352 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
ALDH1A1P00352 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC19.21■□□□□ 0.67
ALDH1A1P00352 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC19.21■□□□□ 0.67
ALDH1A1P00352 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC19.21■□□□□ 0.67
ALDH1A1P00352 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
ALDH1A1P00352 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC19.21■□□□□ 0.67
ALDH1A1P00352 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ALDH1A1P00352 PFAS-212ENST00000625942 396 ntTSL 5 BASIC19.21■□□□□ 0.67
ALDH1A1P00352 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC19.21■□□□□ 0.67
ALDH1A1P00352 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ALDH1A1P00352 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC19.21■□□□□ 0.67
ALDH1A1P00352 LINC00895-201ENST00000629028 1637 ntBASIC19.21■□□□□ 0.67
ALDH1A1P00352 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ALDH1A1P00352 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
ALDH1A1P00352 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC19.21■□□□□ 0.67
ALDH1A1P00352 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC19.2■□□□□ 0.66
ALDH1A1P00352 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC19.2■□□□□ 0.66
ALDH1A1P00352 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC19.2■□□□□ 0.66
ALDH1A1P00352 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC19.2■□□□□ 0.66
ALDH1A1P00352 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC19.2■□□□□ 0.66
ALDH1A1P00352 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ALDH1A1P00352 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
ALDH1A1P00352 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
ALDH1A1P00352 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ALDH1A1P00352 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
ALDH1A1P00352 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC19.2■□□□□ 0.66
ALDH1A1P00352 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ALDH1A1P00352 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ALDH1A1P00352 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC19.2■□□□□ 0.66
ALDH1A1P00352 FAM86MP-201ENST00000340703 885 ntBASIC19.2■□□□□ 0.66
ALDH1A1P00352 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
ALDH1A1P00352 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
ALDH1A1P00352 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC19.2■□□□□ 0.66
ALDH1A1P00352 GALT-202ENST00000450095 1280 ntTSL 2 BASIC19.2■□□□□ 0.66
ALDH1A1P00352 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
ALDH1A1P00352 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
ALDH1A1P00352 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC19.2■□□□□ 0.66
ALDH1A1P00352 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC19.2■□□□□ 0.66
ALDH1A1P00352 AL133215.2-201ENST00000609242 977 ntBASIC19.2■□□□□ 0.66
ALDH1A1P00352 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC19.2■□□□□ 0.66
ALDH1A1P00352 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC19.2■□□□□ 0.66
ALDH1A1P00352 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ALDH1A1P00352 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
ALDH1A1P00352 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
ALDH1A1P00352 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ALDH1A1P00352 LYSMD4-203ENST00000378904 2122 ntBASIC19.19■□□□□ 0.66
ALDH1A1P00352 LINC00896-202ENST00000609602 2128 ntBASIC19.19■□□□□ 0.66
ALDH1A1P00352 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
ALDH1A1P00352 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ALDH1A1P00352 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ALDH1A1P00352 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
ALDH1A1P00352 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
ALDH1A1P00352 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
ALDH1A1P00352 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
ALDH1A1P00352 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ALDH1A1P00352 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC19.19■□□□□ 0.66
ALDH1A1P00352 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ALDH1A1P00352 BOLA2P3-201ENST00000404566 256 ntBASIC19.19■□□□□ 0.66
ALDH1A1P00352 MPV17-208ENST00000405076 603 ntTSL 5 BASIC19.19■□□□□ 0.66
ALDH1A1P00352 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
ALDH1A1P00352 AC098859.1-201ENST00000502915 1238 ntBASIC19.19■□□□□ 0.66
ALDH1A1P00352 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ALDH1A1P00352 MIR4259-201ENST00000584466 101 ntBASIC19.19■□□□□ 0.66
ALDH1A1P00352 CYP2A7P1-201ENST00000595391 815 ntBASIC19.19■□□□□ 0.66
ALDH1A1P00352 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ALDH1A1P00352 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ALDH1A1P00352 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ALDH1A1P00352 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
ALDH1A1P00352 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
ALDH1A1P00352 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ALDH1A1P00352 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC19.19■□□□□ 0.66
ALDH1A1P00352 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
ALDH1A1P00352 REXO1L6P-201ENST00000603433 1515 ntBASIC19.19■□□□□ 0.66
ALDH1A1P00352 HARS-204ENST00000438307 1789 ntTSL 2 BASIC19.19■□□□□ 0.66
ALDH1A1P00352 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC19.19■□□□□ 0.66
ALDH1A1P00352 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
ALDH1A1P00352 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ALDH1A1P00352 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ALDH1A1P00352 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC19.18■□□□□ 0.66
ALDH1A1P00352 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
ALDH1A1P00352 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
ALDH1A1P00352 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC19.18■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms