Protein–RNA interactions for Protein: O95985

TOP3B, DNA topoisomerase 3-beta-1, humanhuman

Known RBP Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3BO95985 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TOP3BO95985 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TOP3BO95985 SYS1-203ENST00000414310 795 ntTSL 3 BASIC17.48■□□□□ 0.39
TOP3BO95985 COX20P2-201ENST00000452636 358 ntBASIC17.48■□□□□ 0.39
TOP3BO95985 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC17.48■□□□□ 0.39
TOP3BO95985 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC17.48■□□□□ 0.39
TOP3BO95985 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC17.48■□□□□ 0.39
TOP3BO95985 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC17.48■□□□□ 0.39
TOP3BO95985 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC17.48■□□□□ 0.39
TOP3BO95985 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC17.48■□□□□ 0.39
TOP3BO95985 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TOP3BO95985 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC17.48■□□□□ 0.39
TOP3BO95985 AC009154.2-201ENST00000621177 724 ntBASIC17.48■□□□□ 0.39
TOP3BO95985 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TOP3BO95985 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
TOP3BO95985 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TOP3BO95985 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
TOP3BO95985 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TOP3BO95985 RHBDF1P1-201ENST00000427504 1941 ntBASIC17.48■□□□□ 0.39
TOP3BO95985 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
TOP3BO95985 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
TOP3BO95985 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC17.48■□□□□ 0.39
TOP3BO95985 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TOP3BO95985 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
TOP3BO95985 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TOP3BO95985 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TOP3BO95985 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
TOP3BO95985 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TOP3BO95985 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC17.48■□□□□ 0.39
TOP3BO95985 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TOP3BO95985 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
TOP3BO95985 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TOP3BO95985 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
TOP3BO95985 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC17.47■□□□□ 0.39
TOP3BO95985 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TOP3BO95985 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC17.47■□□□□ 0.39
TOP3BO95985 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
TOP3BO95985 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC17.47■□□□□ 0.39
TOP3BO95985 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC17.47■□□□□ 0.39
TOP3BO95985 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TOP3BO95985 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC17.47■□□□□ 0.39
TOP3BO95985 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC17.47■□□□□ 0.39
TOP3BO95985 FUOM-202ENST00000368551 628 ntTSL 3 BASIC17.47■□□□□ 0.39
TOP3BO95985 MIR770-201ENST00000390219 98 ntBASIC17.47■□□□□ 0.39
TOP3BO95985 AL645939.2-201ENST00000427340 991 ntBASIC17.47■□□□□ 0.39
TOP3BO95985 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC17.47■□□□□ 0.39
TOP3BO95985 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TOP3BO95985 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC17.47■□□□□ 0.39
TOP3BO95985 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC17.47■□□□□ 0.39
TOP3BO95985 AC008735.5-201ENST00000623544 497 ntBASIC17.47■□□□□ 0.39
TOP3BO95985 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC17.47■□□□□ 0.39
TOP3BO95985 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC17.47■□□□□ 0.39
TOP3BO95985 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
TOP3BO95985 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC17.47■□□□□ 0.39
TOP3BO95985 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC17.47■□□□□ 0.39
TOP3BO95985 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
TOP3BO95985 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TOP3BO95985 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
TOP3BO95985 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
TOP3BO95985 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
TOP3BO95985 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
TOP3BO95985 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
TOP3BO95985 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TOP3BO95985 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TOP3BO95985 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TOP3BO95985 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TOP3BO95985 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TOP3BO95985 INTS4P1-201ENST00000438455 1935 ntBASIC17.47■□□□□ 0.39
TOP3BO95985 AC092053.1-201ENST00000605787 1936 ntBASIC17.47■□□□□ 0.39
TOP3BO95985 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
TOP3BO95985 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC17.47■□□□□ 0.39
TOP3BO95985 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC17.47■□□□□ 0.39
TOP3BO95985 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
TOP3BO95985 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
TOP3BO95985 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC17.46■□□□□ 0.39
TOP3BO95985 AC116353.5-201ENST00000638148 1699 ntBASIC17.46■□□□□ 0.39
TOP3BO95985 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
TOP3BO95985 INIP-202ENST00000374236 874 ntTSL 2 BASIC17.46■□□□□ 0.39
TOP3BO95985 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC17.46■□□□□ 0.39
TOP3BO95985 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC17.46■□□□□ 0.39
TOP3BO95985 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
TOP3BO95985 RBSN-204ENST00000449050 903 ntTSL 2 BASIC17.46■□□□□ 0.39
TOP3BO95985 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC17.46■□□□□ 0.39
TOP3BO95985 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC17.46■□□□□ 0.39
TOP3BO95985 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC17.46■□□□□ 0.39
TOP3BO95985 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC17.46■□□□□ 0.39
TOP3BO95985 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC17.46■□□□□ 0.39
TOP3BO95985 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC17.46■□□□□ 0.39
TOP3BO95985 BX276092.7-203ENST00000637198 1536 ntBASIC17.46■□□□□ 0.39
TOP3BO95985 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
TOP3BO95985 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
TOP3BO95985 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TOP3BO95985 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
TOP3BO95985 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.39
TOP3BO95985 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
TOP3BO95985 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC17.46■□□□□ 0.38
TOP3BO95985 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.38
TOP3BO95985 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TOP3BO95985 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TOP3BO95985 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 62.8 ms