Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC15.98■□□□□ 0.15
HCN1O60741 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
HCN1O60741 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC15.98■□□□□ 0.15
HCN1O60741 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
HCN1O60741 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC15.98■□□□□ 0.15
HCN1O60741 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
HCN1O60741 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC15.98■□□□□ 0.15
HCN1O60741 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
HCN1O60741 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
HCN1O60741 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC15.98■□□□□ 0.15
HCN1O60741 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
HCN1O60741 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
HCN1O60741 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC15.98■□□□□ 0.15
HCN1O60741 AP000347.1-202ENST00000435868 847 ntBASIC15.98■□□□□ 0.15
HCN1O60741 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC15.98■□□□□ 0.15
HCN1O60741 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
HCN1O60741 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC15.98■□□□□ 0.15
HCN1O60741 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC15.98■□□□□ 0.15
HCN1O60741 SART3-203ENST00000546611 1184 ntBASIC15.98■□□□□ 0.15
HCN1O60741 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC15.98■□□□□ 0.15
HCN1O60741 PRKN-208ENST00000610470 531 ntTSL 2 BASIC15.98■□□□□ 0.15
HCN1O60741 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC15.98■□□□□ 0.15
HCN1O60741 AC120114.3-201ENST00000611923 658 ntBASIC15.98■□□□□ 0.15
HCN1O60741 PRKN-209ENST00000612485 225 ntTSL 5 BASIC15.98■□□□□ 0.15
HCN1O60741 AC148477.8-201ENST00000624298 468 ntBASIC15.98■□□□□ 0.15
HCN1O60741 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
HCN1O60741 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
HCN1O60741 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC15.98■□□□□ 0.15
HCN1O60741 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC15.98■□□□□ 0.15
HCN1O60741 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC15.98■□□□□ 0.15
HCN1O60741 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
HCN1O60741 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
HCN1O60741 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
HCN1O60741 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
HCN1O60741 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC15.98■□□□□ 0.15
HCN1O60741 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
HCN1O60741 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
HCN1O60741 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
HCN1O60741 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
HCN1O60741 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
HCN1O60741 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC15.97■□□□□ 0.15
HCN1O60741 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
HCN1O60741 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
HCN1O60741 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
HCN1O60741 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC15.97■□□□□ 0.15
HCN1O60741 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
HCN1O60741 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
HCN1O60741 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC15.97■□□□□ 0.15
HCN1O60741 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
HCN1O60741 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC15.97■□□□□ 0.15
HCN1O60741 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC15.97■□□□□ 0.15
HCN1O60741 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
HCN1O60741 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC15.97■□□□□ 0.15
HCN1O60741 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
HCN1O60741 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC15.97■□□□□ 0.15
HCN1O60741 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
HCN1O60741 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
HCN1O60741 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
HCN1O60741 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC15.97■□□□□ 0.15
HCN1O60741 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC15.97■□□□□ 0.15
HCN1O60741 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC15.97■□□□□ 0.15
HCN1O60741 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
HCN1O60741 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC15.97■□□□□ 0.15
HCN1O60741 AC021087.4-201ENST00000563761 564 ntBASIC15.97■□□□□ 0.15
HCN1O60741 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
HCN1O60741 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
HCN1O60741 AD001527.2-201ENST00000622994 785 ntBASIC15.97■□□□□ 0.15
HCN1O60741 FAM215A-202ENST00000632077 792 ntBASIC15.97■□□□□ 0.15
HCN1O60741 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
HCN1O60741 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
HCN1O60741 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
HCN1O60741 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
HCN1O60741 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC15.97■□□□□ 0.15
HCN1O60741 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
HCN1O60741 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC15.97■□□□□ 0.15
HCN1O60741 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
HCN1O60741 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
HCN1O60741 LYSMD4-203ENST00000378904 2122 ntBASIC15.97■□□□□ 0.15
HCN1O60741 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
HCN1O60741 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
HCN1O60741 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
HCN1O60741 IL9RP2-201ENST00000423948 1312 ntBASIC15.96■□□□□ 0.15
HCN1O60741 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
HCN1O60741 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
HCN1O60741 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC15.96■□□□□ 0.15
HCN1O60741 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
HCN1O60741 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
HCN1O60741 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC15.96■□□□□ 0.15
HCN1O60741 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
HCN1O60741 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC15.96■□□□□ 0.15
HCN1O60741 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
HCN1O60741 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
HCN1O60741 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
HCN1O60741 RAB17-203ENST00000409576 466 ntTSL 3 BASIC15.96■□□□□ 0.15
HCN1O60741 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
HCN1O60741 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC15.96■□□□□ 0.15
HCN1O60741 AC139887.3-201ENST00000568585 713 ntBASIC15.96■□□□□ 0.15
HCN1O60741 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC15.96■□□□□ 0.15
HCN1O60741 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC15.96■□□□□ 0.15
HCN1O60741 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms