Protein–RNA interactions for Protein: O43189

PHF1, PHD finger protein 1, humanhuman

Predicted RBP Predictions only

Length 567 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1O43189 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PHF1O43189 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
PHF1O43189 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
PHF1O43189 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
PHF1O43189 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC14.78□□□□□ -0.04
PHF1O43189 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC14.78□□□□□ -0.04
PHF1O43189 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC14.78□□□□□ -0.04
PHF1O43189 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC14.78□□□□□ -0.04
PHF1O43189 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC14.78□□□□□ -0.04
PHF1O43189 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
PHF1O43189 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC14.78□□□□□ -0.04
PHF1O43189 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PHF1O43189 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC14.78□□□□□ -0.04
PHF1O43189 TBC1D3P5-201ENST00000579401 1545 ntBASIC14.78□□□□□ -0.04
PHF1O43189 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
PHF1O43189 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
PHF1O43189 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC14.78□□□□□ -0.04
PHF1O43189 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC14.78□□□□□ -0.04
PHF1O43189 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC14.78□□□□□ -0.04
PHF1O43189 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PHF1O43189 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
PHF1O43189 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PHF1O43189 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
PHF1O43189 CCS-201ENST00000310190 942 ntTSL 5 BASIC14.78□□□□□ -0.04
PHF1O43189 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
PHF1O43189 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PHF1O43189 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC14.78□□□□□ -0.04
PHF1O43189 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC14.78□□□□□ -0.04
PHF1O43189 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC14.78□□□□□ -0.04
PHF1O43189 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC14.78□□□□□ -0.04
PHF1O43189 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC14.78□□□□□ -0.04
PHF1O43189 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PHF1O43189 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PHF1O43189 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
PHF1O43189 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
PHF1O43189 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
PHF1O43189 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC14.78□□□□□ -0.04
PHF1O43189 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
PHF1O43189 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
PHF1O43189 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
PHF1O43189 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
PHF1O43189 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
PHF1O43189 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
PHF1O43189 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
PHF1O43189 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
PHF1O43189 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
PHF1O43189 KRT8P47-201ENST00000604727 1398 ntBASIC14.77□□□□□ -0.04
PHF1O43189 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
PHF1O43189 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
PHF1O43189 FUOM-202ENST00000368551 628 ntTSL 3 BASIC14.77□□□□□ -0.05
PHF1O43189 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
PHF1O43189 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
PHF1O43189 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC14.77□□□□□ -0.05
PHF1O43189 FIS1-203ENST00000442303 631 ntTSL 3 BASIC14.77□□□□□ -0.05
PHF1O43189 AL591424.1-201ENST00000442569 1213 ntBASIC14.77□□□□□ -0.05
PHF1O43189 DANCR-204ENST00000444958 709 ntTSL 3 BASIC14.77□□□□□ -0.05
PHF1O43189 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC14.77□□□□□ -0.05
PHF1O43189 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC14.77□□□□□ -0.05
PHF1O43189 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
PHF1O43189 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC14.77□□□□□ -0.05
PHF1O43189 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC14.77□□□□□ -0.05
PHF1O43189 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
PHF1O43189 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC14.77□□□□□ -0.05
PHF1O43189 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC14.77□□□□□ -0.05
PHF1O43189 AC145285.3-201ENST00000564603 959 ntBASIC14.77□□□□□ -0.05
PHF1O43189 AC011467.2-201ENST00000598425 242 ntBASIC14.77□□□□□ -0.05
PHF1O43189 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC14.77□□□□□ -0.05
PHF1O43189 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
PHF1O43189 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC14.77□□□□□ -0.05
PHF1O43189 AL355877.3-201ENST00000622820 899 ntBASIC14.77□□□□□ -0.05
PHF1O43189 LINC00304-203ENST00000565008 1864 ntBASIC14.77□□□□□ -0.05
PHF1O43189 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
PHF1O43189 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC14.77□□□□□ -0.05
PHF1O43189 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
PHF1O43189 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC14.77□□□□□ -0.05
PHF1O43189 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
PHF1O43189 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
PHF1O43189 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
PHF1O43189 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
PHF1O43189 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
PHF1O43189 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
PHF1O43189 HLA-J-201ENST00000462773 1622 ntBASIC14.77□□□□□ -0.05
PHF1O43189 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
PHF1O43189 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
PHF1O43189 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC14.77□□□□□ -0.05
PHF1O43189 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
PHF1O43189 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC14.76□□□□□ -0.05
PHF1O43189 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PHF1O43189 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC14.76□□□□□ -0.05
PHF1O43189 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
PHF1O43189 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
PHF1O43189 INTS4P1-201ENST00000438455 1935 ntBASIC14.76□□□□□ -0.05
PHF1O43189 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC14.76□□□□□ -0.05
PHF1O43189 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC14.76□□□□□ -0.05
PHF1O43189 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
PHF1O43189 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PHF1O43189 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC14.76□□□□□ -0.05
PHF1O43189 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC14.76□□□□□ -0.05
PHF1O43189 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
PHF1O43189 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC14.76□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms