Protein–RNA interactions for Protein: O43181

NDUFS4, NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial, humanhuman

Predictions only

Length 175 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS4O43181 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
NDUFS4O43181 PCDHA12-202ENST00000613593 2588 ntBASIC16.33■□□□□ 0.2
NDUFS4O43181 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
NDUFS4O43181 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NDUFS4O43181 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
NDUFS4O43181 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NDUFS4O43181 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NDUFS4O43181 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NDUFS4O43181 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC16.32■□□□□ 0.2
NDUFS4O43181 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
NDUFS4O43181 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
NDUFS4O43181 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
NDUFS4O43181 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
NDUFS4O43181 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
NDUFS4O43181 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
NDUFS4O43181 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
NDUFS4O43181 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NDUFS4O43181 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
NDUFS4O43181 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
NDUFS4O43181 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC16.32■□□□□ 0.2
NDUFS4O43181 AC005915.1-201ENST00000624912 2018 ntBASIC16.32■□□□□ 0.2
NDUFS4O43181 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
NDUFS4O43181 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
NDUFS4O43181 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NDUFS4O43181 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NDUFS4O43181 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NDUFS4O43181 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NDUFS4O43181 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC16.32■□□□□ 0.2
NDUFS4O43181 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NDUFS4O43181 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
NDUFS4O43181 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
NDUFS4O43181 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
NDUFS4O43181 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC16.31■□□□□ 0.2
NDUFS4O43181 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
NDUFS4O43181 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
NDUFS4O43181 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NDUFS4O43181 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
NDUFS4O43181 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC16.31■□□□□ 0.2
NDUFS4O43181 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC16.31■□□□□ 0.2
NDUFS4O43181 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC16.31■□□□□ 0.2
NDUFS4O43181 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NDUFS4O43181 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NDUFS4O43181 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NDUFS4O43181 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
NDUFS4O43181 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
NDUFS4O43181 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NDUFS4O43181 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
NDUFS4O43181 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NDUFS4O43181 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NDUFS4O43181 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
NDUFS4O43181 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
NDUFS4O43181 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
NDUFS4O43181 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NDUFS4O43181 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
NDUFS4O43181 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
NDUFS4O43181 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC16.3■□□□□ 0.2
NDUFS4O43181 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
NDUFS4O43181 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
NDUFS4O43181 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NDUFS4O43181 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NDUFS4O43181 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NDUFS4O43181 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NDUFS4O43181 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC16.3■□□□□ 0.2
NDUFS4O43181 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
NDUFS4O43181 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
NDUFS4O43181 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NDUFS4O43181 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
NDUFS4O43181 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
NDUFS4O43181 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NDUFS4O43181 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC16.3■□□□□ 0.2
NDUFS4O43181 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC16.3■□□□□ 0.2
NDUFS4O43181 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC16.3■□□□□ 0.2
NDUFS4O43181 TERC-201ENST00000602385 541 ntBASIC16.3■□□□□ 0.2
NDUFS4O43181 AC008667.4-201ENST00000607370 168 ntBASIC16.3■□□□□ 0.2
NDUFS4O43181 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC16.3■□□□□ 0.2
NDUFS4O43181 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC16.3■□□□□ 0.2
NDUFS4O43181 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC16.3■□□□□ 0.2
NDUFS4O43181 AF228730.7-201ENST00000641842 219 ntBASIC16.3■□□□□ 0.2
NDUFS4O43181 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC16.3■□□□□ 0.2
NDUFS4O43181 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NDUFS4O43181 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NDUFS4O43181 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
NDUFS4O43181 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC16.3■□□□□ 0.2
NDUFS4O43181 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
NDUFS4O43181 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC16.3■□□□□ 0.2
NDUFS4O43181 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
NDUFS4O43181 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC16.3■□□□□ 0.2
NDUFS4O43181 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
NDUFS4O43181 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
NDUFS4O43181 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
NDUFS4O43181 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NDUFS4O43181 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
NDUFS4O43181 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC16.29■□□□□ 0.2
NDUFS4O43181 AC105020.1-201ENST00000435356 2205 ntBASIC16.29■□□□□ 0.2
NDUFS4O43181 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NDUFS4O43181 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC16.29■□□□□ 0.2
NDUFS4O43181 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
NDUFS4O43181 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
NDUFS4O43181 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NDUFS4O43181 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms