Protein–RNA interactions for Protein: O15239

NDUFA1, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA1O15239 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
NDUFA1O15239 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
NDUFA1O15239 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
NDUFA1O15239 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC11.7□□□□□ -0.54
NDUFA1O15239 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC11.7□□□□□ -0.54
NDUFA1O15239 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
NDUFA1O15239 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
NDUFA1O15239 COX11P1-201ENST00000489116 835 ntBASIC11.7□□□□□ -0.54
NDUFA1O15239 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
NDUFA1O15239 PPOX-214ENST00000535223 664 ntTSL 3 BASIC11.7□□□□□ -0.54
NDUFA1O15239 DET1-205ENST00000558413 583 ntTSL 4 BASIC11.7□□□□□ -0.54
NDUFA1O15239 TEN1-204ENST00000588202 862 ntTSL 3 BASIC11.7□□□□□ -0.54
NDUFA1O15239 TK1-205ENST00000590862 642 ntTSL 3 BASIC11.7□□□□□ -0.54
NDUFA1O15239 AC145285.6-201ENST00000604632 637 ntBASIC11.7□□□□□ -0.54
NDUFA1O15239 GXYLT1P4-201ENST00000613576 1192 ntBASIC11.7□□□□□ -0.54
NDUFA1O15239 ANKRD20A8P-203ENST00000641373 517 ntBASIC11.7□□□□□ -0.54
NDUFA1O15239 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
NDUFA1O15239 HYMAI-201ENST00000635591 3347 ntBASIC11.7□□□□□ -0.54
NDUFA1O15239 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
NDUFA1O15239 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC11.7□□□□□ -0.54
NDUFA1O15239 AL365203.3-201ENST00000609742 2057 ntBASIC11.7□□□□□ -0.54
NDUFA1O15239 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
NDUFA1O15239 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
NDUFA1O15239 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
NDUFA1O15239 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
NDUFA1O15239 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
NDUFA1O15239 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
NDUFA1O15239 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
NDUFA1O15239 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
NDUFA1O15239 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC11.7□□□□□ -0.54
NDUFA1O15239 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
NDUFA1O15239 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
NDUFA1O15239 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC11.7□□□□□ -0.54
NDUFA1O15239 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC11.7□□□□□ -0.54
NDUFA1O15239 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
NDUFA1O15239 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
NDUFA1O15239 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC11.7□□□□□ -0.54
NDUFA1O15239 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC11.7□□□□□ -0.54
NDUFA1O15239 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC11.7□□□□□ -0.54
NDUFA1O15239 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
NDUFA1O15239 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
NDUFA1O15239 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
NDUFA1O15239 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
NDUFA1O15239 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC11.69□□□□□ -0.54
NDUFA1O15239 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
NDUFA1O15239 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
NDUFA1O15239 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
NDUFA1O15239 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
NDUFA1O15239 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
NDUFA1O15239 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
NDUFA1O15239 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
NDUFA1O15239 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
NDUFA1O15239 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
NDUFA1O15239 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
NDUFA1O15239 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC11.69□□□□□ -0.54
NDUFA1O15239 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
NDUFA1O15239 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
NDUFA1O15239 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
NDUFA1O15239 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC11.69□□□□□ -0.54
NDUFA1O15239 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
NDUFA1O15239 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
NDUFA1O15239 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
NDUFA1O15239 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
NDUFA1O15239 SLC25A3P1-201ENST00000443844 931 ntBASIC11.69□□□□□ -0.54
NDUFA1O15239 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC11.69□□□□□ -0.54
NDUFA1O15239 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC11.69□□□□□ -0.54
NDUFA1O15239 ZNF444P1-201ENST00000559497 298 ntBASIC11.69□□□□□ -0.54
NDUFA1O15239 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC11.69□□□□□ -0.54
NDUFA1O15239 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
NDUFA1O15239 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
NDUFA1O15239 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
NDUFA1O15239 AL138966.2-201ENST00000621997 464 ntBASIC11.69□□□□□ -0.54
NDUFA1O15239 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
NDUFA1O15239 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
NDUFA1O15239 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC11.69□□□□□ -0.54
NDUFA1O15239 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC11.69□□□□□ -0.54
NDUFA1O15239 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC11.69□□□□□ -0.54
NDUFA1O15239 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
NDUFA1O15239 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC11.69□□□□□ -0.54
NDUFA1O15239 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
NDUFA1O15239 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
NDUFA1O15239 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
NDUFA1O15239 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
NDUFA1O15239 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
NDUFA1O15239 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC11.69□□□□□ -0.54
NDUFA1O15239 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC11.69□□□□□ -0.54
NDUFA1O15239 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC11.69□□□□□ -0.54
NDUFA1O15239 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC11.68□□□□□ -0.54
NDUFA1O15239 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
NDUFA1O15239 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
NDUFA1O15239 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
NDUFA1O15239 AC067930.6-201ENST00000623257 4947 ntBASIC11.68□□□□□ -0.54
NDUFA1O15239 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
NDUFA1O15239 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC11.68□□□□□ -0.54
NDUFA1O15239 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC11.68□□□□□ -0.54
NDUFA1O15239 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
NDUFA1O15239 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
NDUFA1O15239 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC11.68□□□□□ -0.54
NDUFA1O15239 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
NDUFA1O15239 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms