Protein–RNA interactions for Protein: O15041

SEMA3E, Semaphorin-3E, humanhuman

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3EO15041 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
SEMA3EO15041 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
SEMA3EO15041 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC20.38■□□□□ 0.85
SEMA3EO15041 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SEMA3EO15041 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SEMA3EO15041 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SEMA3EO15041 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SEMA3EO15041 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC20.38■□□□□ 0.85
SEMA3EO15041 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SEMA3EO15041 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SEMA3EO15041 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SEMA3EO15041 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
SEMA3EO15041 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC20.38■□□□□ 0.85
SEMA3EO15041 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SEMA3EO15041 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SEMA3EO15041 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SEMA3EO15041 CDK2AP2P3-201ENST00000422476 372 ntBASIC20.38■□□□□ 0.85
SEMA3EO15041 AC005237.2-201ENST00000434368 219 ntBASIC20.38■□□□□ 0.85
SEMA3EO15041 SPCS2P4-201ENST00000436160 681 ntBASIC20.38■□□□□ 0.85
SEMA3EO15041 HMGN1P19-201ENST00000436976 333 ntBASIC20.38■□□□□ 0.85
SEMA3EO15041 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SEMA3EO15041 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC20.38■□□□□ 0.85
SEMA3EO15041 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC20.38■□□□□ 0.85
SEMA3EO15041 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SEMA3EO15041 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
SEMA3EO15041 LINC01225-203ENST00000563550 1244 ntBASIC20.38■□□□□ 0.85
SEMA3EO15041 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC20.38■□□□□ 0.85
SEMA3EO15041 LSM12-202ENST00000585388 942 ntTSL 3 BASIC20.38■□□□□ 0.85
SEMA3EO15041 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
SEMA3EO15041 AC021097.1-201ENST00000607902 574 ntBASIC20.38■□□□□ 0.85
SEMA3EO15041 AC093028.1-201ENST00000622998 982 ntBASIC20.38■□□□□ 0.85
SEMA3EO15041 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC20.38■□□□□ 0.85
SEMA3EO15041 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC20.38■□□□□ 0.85
SEMA3EO15041 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SEMA3EO15041 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SEMA3EO15041 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SEMA3EO15041 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
SEMA3EO15041 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC20.38■□□□□ 0.85
SEMA3EO15041 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
SEMA3EO15041 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SEMA3EO15041 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC20.38■□□□□ 0.85
SEMA3EO15041 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
SEMA3EO15041 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SEMA3EO15041 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
SEMA3EO15041 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
SEMA3EO15041 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
SEMA3EO15041 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
SEMA3EO15041 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC20.37■□□□□ 0.85
SEMA3EO15041 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SEMA3EO15041 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SEMA3EO15041 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC20.37■□□□□ 0.85
SEMA3EO15041 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC20.37■□□□□ 0.85
SEMA3EO15041 AC069335.1-201ENST00000489972 472 ntBASIC20.37■□□□□ 0.85
SEMA3EO15041 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC20.37■□□□□ 0.85
SEMA3EO15041 AC025678.2-201ENST00000562061 970 ntBASIC20.37■□□□□ 0.85
SEMA3EO15041 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC20.37■□□□□ 0.85
SEMA3EO15041 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC20.37■□□□□ 0.85
SEMA3EO15041 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC20.37■□□□□ 0.85
SEMA3EO15041 AC013467.2-201ENST00000605472 835 ntBASIC20.37■□□□□ 0.85
SEMA3EO15041 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC20.37■□□□□ 0.85
SEMA3EO15041 ORC5-208ENST00000626700 344 ntTSL 3 BASIC20.37■□□□□ 0.85
SEMA3EO15041 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC20.37■□□□□ 0.85
SEMA3EO15041 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SEMA3EO15041 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC20.37■□□□□ 0.85
SEMA3EO15041 SLC9A3P2-201ENST00000447821 2021 ntBASIC20.37■□□□□ 0.85
SEMA3EO15041 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
SEMA3EO15041 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SEMA3EO15041 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SEMA3EO15041 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC20.37■□□□□ 0.85
SEMA3EO15041 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SEMA3EO15041 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
SEMA3EO15041 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
SEMA3EO15041 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
SEMA3EO15041 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SEMA3EO15041 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC20.36■□□□□ 0.85
SEMA3EO15041 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
SEMA3EO15041 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
SEMA3EO15041 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
SEMA3EO15041 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
SEMA3EO15041 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
SEMA3EO15041 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
SEMA3EO15041 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SEMA3EO15041 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
SEMA3EO15041 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
SEMA3EO15041 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SEMA3EO15041 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
SEMA3EO15041 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC20.36■□□□□ 0.85
SEMA3EO15041 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC20.36■□□□□ 0.85
SEMA3EO15041 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC20.36■□□□□ 0.85
SEMA3EO15041 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC20.36■□□□□ 0.85
SEMA3EO15041 AC109322.1-201ENST00000524499 1264 ntBASIC20.36■□□□□ 0.85
SEMA3EO15041 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC20.36■□□□□ 0.85
SEMA3EO15041 AC004449.1-201ENST00000564240 433 ntBASIC20.36■□□□□ 0.85
SEMA3EO15041 AC015911.4-201ENST00000588022 1070 ntBASIC20.36■□□□□ 0.85
SEMA3EO15041 LINC00628-201ENST00000628516 1289 ntBASIC20.36■□□□□ 0.85
SEMA3EO15041 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
SEMA3EO15041 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SEMA3EO15041 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SEMA3EO15041 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
SEMA3EO15041 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC20.36■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms