Protein–RNA interactions for Protein: A6NHC0

CAPN8, Calpain-8, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN8A6NHC0 KRT18P27-201ENST00000427733 1299 ntBASIC17.33■□□□□ 0.36
CAPN8A6NHC0 AC244107.1-201ENST00000442033 332 ntBASIC17.33■□□□□ 0.36
CAPN8A6NHC0 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC17.33■□□□□ 0.36
CAPN8A6NHC0 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CAPN8A6NHC0 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC17.33■□□□□ 0.36
CAPN8A6NHC0 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC17.33■□□□□ 0.36
CAPN8A6NHC0 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC17.33■□□□□ 0.36
CAPN8A6NHC0 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
CAPN8A6NHC0 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC17.33■□□□□ 0.36
CAPN8A6NHC0 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC17.33■□□□□ 0.36
CAPN8A6NHC0 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CAPN8A6NHC0 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CAPN8A6NHC0 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CAPN8A6NHC0 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC17.33■□□□□ 0.36
CAPN8A6NHC0 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
CAPN8A6NHC0 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CAPN8A6NHC0 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
CAPN8A6NHC0 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC17.33■□□□□ 0.36
CAPN8A6NHC0 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CAPN8A6NHC0 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CAPN8A6NHC0 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC17.32■□□□□ 0.36
CAPN8A6NHC0 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
CAPN8A6NHC0 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC17.32■□□□□ 0.36
CAPN8A6NHC0 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CAPN8A6NHC0 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CAPN8A6NHC0 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CAPN8A6NHC0 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC17.32■□□□□ 0.36
CAPN8A6NHC0 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CAPN8A6NHC0 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC17.32■□□□□ 0.36
CAPN8A6NHC0 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC17.32■□□□□ 0.36
CAPN8A6NHC0 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CAPN8A6NHC0 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC17.32■□□□□ 0.36
CAPN8A6NHC0 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC17.32■□□□□ 0.36
CAPN8A6NHC0 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC17.32■□□□□ 0.36
CAPN8A6NHC0 ELK2BP-201ENST00000415014 1224 ntBASIC17.32■□□□□ 0.36
CAPN8A6NHC0 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CAPN8A6NHC0 ARTN-206ENST00000472435 402 ntTSL 3 BASIC17.32■□□□□ 0.36
CAPN8A6NHC0 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CAPN8A6NHC0 PGAM5P1-201ENST00000518923 814 ntBASIC17.32■□□□□ 0.36
CAPN8A6NHC0 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC17.32■□□□□ 0.36
CAPN8A6NHC0 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC17.32■□□□□ 0.36
CAPN8A6NHC0 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC17.32■□□□□ 0.36
CAPN8A6NHC0 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CAPN8A6NHC0 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
CAPN8A6NHC0 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC17.32■□□□□ 0.36
CAPN8A6NHC0 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CAPN8A6NHC0 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC17.32■□□□□ 0.36
CAPN8A6NHC0 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
CAPN8A6NHC0 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
CAPN8A6NHC0 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CAPN8A6NHC0 AL121761.2-201ENST00000598007 1648 ntBASIC17.32■□□□□ 0.36
CAPN8A6NHC0 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC17.32■□□□□ 0.36
CAPN8A6NHC0 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CAPN8A6NHC0 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC17.31■□□□□ 0.36
CAPN8A6NHC0 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
CAPN8A6NHC0 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CAPN8A6NHC0 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
CAPN8A6NHC0 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC17.31■□□□□ 0.36
CAPN8A6NHC0 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC17.31■□□□□ 0.36
CAPN8A6NHC0 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CAPN8A6NHC0 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
CAPN8A6NHC0 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC17.31■□□□□ 0.36
CAPN8A6NHC0 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CAPN8A6NHC0 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CAPN8A6NHC0 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CAPN8A6NHC0 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CAPN8A6NHC0 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CAPN8A6NHC0 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC17.31■□□□□ 0.36
CAPN8A6NHC0 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CAPN8A6NHC0 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
CAPN8A6NHC0 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CAPN8A6NHC0 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CAPN8A6NHC0 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
CAPN8A6NHC0 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CAPN8A6NHC0 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
CAPN8A6NHC0 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CAPN8A6NHC0 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CAPN8A6NHC0 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CAPN8A6NHC0 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
CAPN8A6NHC0 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CAPN8A6NHC0 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CAPN8A6NHC0 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
CAPN8A6NHC0 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC17.31■□□□□ 0.36
CAPN8A6NHC0 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CAPN8A6NHC0 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
CAPN8A6NHC0 AL049840.3-201ENST00000602669 611 ntBASIC17.31■□□□□ 0.36
CAPN8A6NHC0 PRKN-208ENST00000610470 531 ntTSL 2 BASIC17.31■□□□□ 0.36
CAPN8A6NHC0 PRKN-209ENST00000612485 225 ntTSL 5 BASIC17.31■□□□□ 0.36
CAPN8A6NHC0 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC17.31■□□□□ 0.36
CAPN8A6NHC0 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC17.31■□□□□ 0.36
CAPN8A6NHC0 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CAPN8A6NHC0 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CAPN8A6NHC0 AL162727.3-201ENST00000635661 2787 ntBASIC17.31■□□□□ 0.36
CAPN8A6NHC0 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CAPN8A6NHC0 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC17.31■□□□□ 0.36
CAPN8A6NHC0 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CAPN8A6NHC0 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
CAPN8A6NHC0 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CAPN8A6NHC0 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CAPN8A6NHC0 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms