Protein–RNA interactions for Protein: A0A1W2PPF3

DUXB, Double homeobox B, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUXBA0A1W2PPF3 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
DUXBA0A1W2PPF3 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC13.94□□□□□ -0.18
DUXBA0A1W2PPF3 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
DUXBA0A1W2PPF3 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
DUXBA0A1W2PPF3 TSPY26P-202ENST00000565928 3884 ntBASIC13.94□□□□□ -0.18
DUXBA0A1W2PPF3 AC068418.2-201ENST00000577309 3703 ntBASIC13.94□□□□□ -0.18
DUXBA0A1W2PPF3 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
DUXBA0A1W2PPF3 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
DUXBA0A1W2PPF3 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
DUXBA0A1W2PPF3 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
DUXBA0A1W2PPF3 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
DUXBA0A1W2PPF3 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
DUXBA0A1W2PPF3 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
DUXBA0A1W2PPF3 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC13.93□□□□□ -0.18
DUXBA0A1W2PPF3 AL353593.2-201ENST00000602529 1483 ntBASIC13.93□□□□□ -0.18
DUXBA0A1W2PPF3 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
DUXBA0A1W2PPF3 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
DUXBA0A1W2PPF3 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
DUXBA0A1W2PPF3 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC13.93□□□□□ -0.18
DUXBA0A1W2PPF3 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
DUXBA0A1W2PPF3 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
DUXBA0A1W2PPF3 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC13.93□□□□□ -0.18
DUXBA0A1W2PPF3 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
DUXBA0A1W2PPF3 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
DUXBA0A1W2PPF3 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC13.93□□□□□ -0.18
DUXBA0A1W2PPF3 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
DUXBA0A1W2PPF3 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
DUXBA0A1W2PPF3 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
DUXBA0A1W2PPF3 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
DUXBA0A1W2PPF3 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
DUXBA0A1W2PPF3 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
DUXBA0A1W2PPF3 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
DUXBA0A1W2PPF3 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
DUXBA0A1W2PPF3 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC13.93□□□□□ -0.18
DUXBA0A1W2PPF3 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
DUXBA0A1W2PPF3 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
DUXBA0A1W2PPF3 FAM220CP-201ENST00000395253 831 ntBASIC13.93□□□□□ -0.18
DUXBA0A1W2PPF3 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
DUXBA0A1W2PPF3 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC13.93□□□□□ -0.18
DUXBA0A1W2PPF3 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
DUXBA0A1W2PPF3 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
DUXBA0A1W2PPF3 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC13.93□□□□□ -0.18
DUXBA0A1W2PPF3 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC13.93□□□□□ -0.18
DUXBA0A1W2PPF3 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC13.93□□□□□ -0.18
DUXBA0A1W2PPF3 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC13.93□□□□□ -0.18
DUXBA0A1W2PPF3 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC13.93□□□□□ -0.18
DUXBA0A1W2PPF3 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC13.93□□□□□ -0.18
DUXBA0A1W2PPF3 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC13.93□□□□□ -0.18
DUXBA0A1W2PPF3 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
DUXBA0A1W2PPF3 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
DUXBA0A1W2PPF3 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC13.93□□□□□ -0.18
DUXBA0A1W2PPF3 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC13.93□□□□□ -0.18
DUXBA0A1W2PPF3 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC13.93□□□□□ -0.18
DUXBA0A1W2PPF3 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
DUXBA0A1W2PPF3 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
DUXBA0A1W2PPF3 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
DUXBA0A1W2PPF3 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
DUXBA0A1W2PPF3 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
DUXBA0A1W2PPF3 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
DUXBA0A1W2PPF3 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
DUXBA0A1W2PPF3 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
DUXBA0A1W2PPF3 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
DUXBA0A1W2PPF3 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
DUXBA0A1W2PPF3 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC13.93□□□□□ -0.18
DUXBA0A1W2PPF3 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC13.93□□□□□ -0.18
DUXBA0A1W2PPF3 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC13.93□□□□□ -0.18
DUXBA0A1W2PPF3 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC13.92□□□□□ -0.18
DUXBA0A1W2PPF3 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
DUXBA0A1W2PPF3 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC13.92□□□□□ -0.18
DUXBA0A1W2PPF3 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
DUXBA0A1W2PPF3 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
DUXBA0A1W2PPF3 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC13.92□□□□□ -0.18
DUXBA0A1W2PPF3 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
DUXBA0A1W2PPF3 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC13.92□□□□□ -0.18
DUXBA0A1W2PPF3 KRT8P10-201ENST00000450021 1447 ntBASIC13.92□□□□□ -0.18
DUXBA0A1W2PPF3 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
DUXBA0A1W2PPF3 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
DUXBA0A1W2PPF3 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
DUXBA0A1W2PPF3 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
DUXBA0A1W2PPF3 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
DUXBA0A1W2PPF3 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC13.92□□□□□ -0.18
DUXBA0A1W2PPF3 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
DUXBA0A1W2PPF3 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC13.92□□□□□ -0.18
DUXBA0A1W2PPF3 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
DUXBA0A1W2PPF3 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
DUXBA0A1W2PPF3 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
DUXBA0A1W2PPF3 MMP23A-201ENST00000234610 1017 ntBASIC13.92□□□□□ -0.18
DUXBA0A1W2PPF3 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
DUXBA0A1W2PPF3 AC003669.1-201ENST00000334569 611 ntBASIC13.92□□□□□ -0.18
DUXBA0A1W2PPF3 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC13.92□□□□□ -0.18
DUXBA0A1W2PPF3 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC13.92□□□□□ -0.18
DUXBA0A1W2PPF3 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC13.92□□□□□ -0.18
DUXBA0A1W2PPF3 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC13.92□□□□□ -0.18
DUXBA0A1W2PPF3 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
DUXBA0A1W2PPF3 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
DUXBA0A1W2PPF3 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC13.92□□□□□ -0.18
DUXBA0A1W2PPF3 AC008550.1-201ENST00000511500 884 ntBASIC13.92□□□□□ -0.18
DUXBA0A1W2PPF3 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC13.92□□□□□ -0.18
DUXBA0A1W2PPF3 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC13.92□□□□□ -0.18
DUXBA0A1W2PPF3 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms