Protein–RNA interactions for Protein: A0A1B0GX56

TRDV1, T-cell receptor delta variable 1 (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRDV1A0A1B0GX56 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
TRDV1A0A1B0GX56 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
TRDV1A0A1B0GX56 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC15.01□□□□□ -0.01
TRDV1A0A1B0GX56 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRDV1A0A1B0GX56 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRDV1A0A1B0GX56 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
TRDV1A0A1B0GX56 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRDV1A0A1B0GX56 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRDV1A0A1B0GX56 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
TRDV1A0A1B0GX56 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRDV1A0A1B0GX56 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
TRDV1A0A1B0GX56 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRDV1A0A1B0GX56 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRDV1A0A1B0GX56 AL603832.2-201ENST00000566195 2125 ntBASIC15.01□□□□□ -0.01
TRDV1A0A1B0GX56 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
TRDV1A0A1B0GX56 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC15.01□□□□□ -0.01
TRDV1A0A1B0GX56 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC15.01□□□□□ -0.01
TRDV1A0A1B0GX56 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRDV1A0A1B0GX56 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRDV1A0A1B0GX56 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
TRDV1A0A1B0GX56 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRDV1A0A1B0GX56 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC15.01□□□□□ -0.01
TRDV1A0A1B0GX56 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC15.01□□□□□ -0.01
TRDV1A0A1B0GX56 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC15.01□□□□□ -0.01
TRDV1A0A1B0GX56 RASA4DP-201ENST00000460726 1199 ntBASIC15.01□□□□□ -0.01
TRDV1A0A1B0GX56 AP003733.1-201ENST00000491725 852 ntBASIC15.01□□□□□ -0.01
TRDV1A0A1B0GX56 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
TRDV1A0A1B0GX56 GCSHP2-201ENST00000560971 527 ntBASIC15.01□□□□□ -0.01
TRDV1A0A1B0GX56 STK25P1-201ENST00000585406 838 ntBASIC15.01□□□□□ -0.01
TRDV1A0A1B0GX56 GPX4-207ENST00000589115 812 ntTSL 2 BASIC15.01□□□□□ -0.01
TRDV1A0A1B0GX56 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
TRDV1A0A1B0GX56 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
TRDV1A0A1B0GX56 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
TRDV1A0A1B0GX56 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRDV1A0A1B0GX56 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRDV1A0A1B0GX56 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC15.01□□□□□ -0.01
TRDV1A0A1B0GX56 FES-204ENST00000414248 2327 ntTSL 2 BASIC15.01□□□□□ -0.01
TRDV1A0A1B0GX56 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC15.01□□□□□ -0.01
TRDV1A0A1B0GX56 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
TRDV1A0A1B0GX56 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC15.01□□□□□ -0.01
TRDV1A0A1B0GX56 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC15.01□□□□□ -0.01
TRDV1A0A1B0GX56 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRDV1A0A1B0GX56 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
TRDV1A0A1B0GX56 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC15.01□□□□□ -0.01
TRDV1A0A1B0GX56 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRDV1A0A1B0GX56 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRDV1A0A1B0GX56 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRDV1A0A1B0GX56 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
TRDV1A0A1B0GX56 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRDV1A0A1B0GX56 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
TRDV1A0A1B0GX56 GCK-202ENST00000345378 2421 ntTSL 2 BASIC15.01□□□□□ -0.01
TRDV1A0A1B0GX56 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC15.01□□□□□ -0.01
TRDV1A0A1B0GX56 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC15.01□□□□□ -0.01
TRDV1A0A1B0GX56 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRDV1A0A1B0GX56 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC15□□□□□ -0.01
TRDV1A0A1B0GX56 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TRDV1A0A1B0GX56 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC15□□□□□ -0.01
TRDV1A0A1B0GX56 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TRDV1A0A1B0GX56 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TRDV1A0A1B0GX56 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
TRDV1A0A1B0GX56 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TRDV1A0A1B0GX56 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
TRDV1A0A1B0GX56 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
TRDV1A0A1B0GX56 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC15□□□□□ -0.01
TRDV1A0A1B0GX56 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC15□□□□□ -0.01
TRDV1A0A1B0GX56 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC15□□□□□ -0.01
TRDV1A0A1B0GX56 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
TRDV1A0A1B0GX56 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TRDV1A0A1B0GX56 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC15□□□□□ -0.01
TRDV1A0A1B0GX56 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC15□□□□□ -0.01
TRDV1A0A1B0GX56 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC15□□□□□ -0.01
TRDV1A0A1B0GX56 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC15□□□□□ -0.01
TRDV1A0A1B0GX56 ECEL1P3-201ENST00000427961 737 ntBASIC15□□□□□ -0.01
TRDV1A0A1B0GX56 AC007967.3-201ENST00000434308 558 ntBASIC15□□□□□ -0.01
TRDV1A0A1B0GX56 HLA-F-220ENST00000434407 884 ntBASIC15□□□□□ -0.01
TRDV1A0A1B0GX56 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC15□□□□□ -0.01
TRDV1A0A1B0GX56 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC15□□□□□ -0.01
TRDV1A0A1B0GX56 AC122714.2-201ENST00000502787 707 ntBASIC15□□□□□ -0.01
TRDV1A0A1B0GX56 FAM87A-204ENST00000613235 858 ntBASIC15□□□□□ -0.01
TRDV1A0A1B0GX56 LITAF-220ENST00000620789 692 ntTSL 5 BASIC15□□□□□ -0.01
TRDV1A0A1B0GX56 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC15□□□□□ -0.01
TRDV1A0A1B0GX56 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TRDV1A0A1B0GX56 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC15□□□□□ -0.01
TRDV1A0A1B0GX56 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC15□□□□□ -0.01
TRDV1A0A1B0GX56 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
TRDV1A0A1B0GX56 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC15□□□□□ -0.01
TRDV1A0A1B0GX56 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TRDV1A0A1B0GX56 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC15□□□□□ -0.01
TRDV1A0A1B0GX56 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC15□□□□□ -0.01
TRDV1A0A1B0GX56 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC15□□□□□ -0.01
TRDV1A0A1B0GX56 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC15□□□□□ -0.01
TRDV1A0A1B0GX56 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
TRDV1A0A1B0GX56 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC15□□□□□ -0.01
TRDV1A0A1B0GX56 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC15□□□□□ -0.01
TRDV1A0A1B0GX56 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC15□□□□□ -0.01
TRDV1A0A1B0GX56 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC15□□□□□ -0.01
TRDV1A0A1B0GX56 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC15□□□□□ -0.01
TRDV1A0A1B0GX56 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC15□□□□□ -0.01
TRDV1A0A1B0GX56 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
TRDV1A0A1B0GX56 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms