Protein–RNA interactions for Protein: A0A075B6X5

TRAV18, T-cell receptor alpha variable 18 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV18A0A075B6X5 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
TRAV18A0A075B6X5 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
TRAV18A0A075B6X5 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
TRAV18A0A075B6X5 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC14.71□□□□□ -0.06
TRAV18A0A075B6X5 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.06
TRAV18A0A075B6X5 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
TRAV18A0A075B6X5 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRAV18A0A075B6X5 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC14.7□□□□□ -0.06
TRAV18A0A075B6X5 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
TRAV18A0A075B6X5 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRAV18A0A075B6X5 ALOX12P2-203ENST00000570921 1945 ntBASIC14.7□□□□□ -0.06
TRAV18A0A075B6X5 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC14.7□□□□□ -0.06
TRAV18A0A075B6X5 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRAV18A0A075B6X5 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRAV18A0A075B6X5 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
TRAV18A0A075B6X5 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRAV18A0A075B6X5 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.06
TRAV18A0A075B6X5 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRAV18A0A075B6X5 AL391256.1-201ENST00000443260 1855 ntBASIC14.7□□□□□ -0.06
TRAV18A0A075B6X5 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRAV18A0A075B6X5 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
TRAV18A0A075B6X5 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRAV18A0A075B6X5 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
TRAV18A0A075B6X5 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRAV18A0A075B6X5 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC14.7□□□□□ -0.06
TRAV18A0A075B6X5 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRAV18A0A075B6X5 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRAV18A0A075B6X5 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRAV18A0A075B6X5 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRAV18A0A075B6X5 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRAV18A0A075B6X5 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC14.7□□□□□ -0.06
TRAV18A0A075B6X5 SAPCD2P2-201ENST00000431719 1174 ntBASIC14.7□□□□□ -0.06
TRAV18A0A075B6X5 TSPY20P-201ENST00000450910 630 ntBASIC14.7□□□□□ -0.06
TRAV18A0A075B6X5 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC14.7□□□□□ -0.06
TRAV18A0A075B6X5 RASA4DP-201ENST00000460726 1199 ntBASIC14.7□□□□□ -0.06
TRAV18A0A075B6X5 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC14.7□□□□□ -0.06
TRAV18A0A075B6X5 NAPSB-206ENST00000562112 1266 ntBASIC14.7□□□□□ -0.06
TRAV18A0A075B6X5 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
TRAV18A0A075B6X5 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
TRAV18A0A075B6X5 AC019129.2-201ENST00000609837 1235 ntBASIC14.7□□□□□ -0.06
TRAV18A0A075B6X5 AC010947.1-201ENST00000623454 693 ntBASIC14.7□□□□□ -0.06
TRAV18A0A075B6X5 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRAV18A0A075B6X5 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
TRAV18A0A075B6X5 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRAV18A0A075B6X5 BANP-201ENST00000286122 2368 ntTSL 5 BASIC14.7□□□□□ -0.06
TRAV18A0A075B6X5 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRAV18A0A075B6X5 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRAV18A0A075B6X5 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRAV18A0A075B6X5 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC14.7□□□□□ -0.06
TRAV18A0A075B6X5 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC14.7□□□□□ -0.06
TRAV18A0A075B6X5 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
TRAV18A0A075B6X5 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRAV18A0A075B6X5 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC14.7□□□□□ -0.06
TRAV18A0A075B6X5 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
TRAV18A0A075B6X5 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
TRAV18A0A075B6X5 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC14.7□□□□□ -0.06
TRAV18A0A075B6X5 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
TRAV18A0A075B6X5 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC14.7□□□□□ -0.06
TRAV18A0A075B6X5 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRAV18A0A075B6X5 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC14.69□□□□□ -0.06
TRAV18A0A075B6X5 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRAV18A0A075B6X5 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
TRAV18A0A075B6X5 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
TRAV18A0A075B6X5 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC14.69□□□□□ -0.06
TRAV18A0A075B6X5 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRAV18A0A075B6X5 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRAV18A0A075B6X5 ENSA-206ENST00000361631 725 ntTSL 2 BASIC14.69□□□□□ -0.06
TRAV18A0A075B6X5 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC14.69□□□□□ -0.06
TRAV18A0A075B6X5 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
TRAV18A0A075B6X5 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC14.69□□□□□ -0.06
TRAV18A0A075B6X5 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC14.69□□□□□ -0.06
TRAV18A0A075B6X5 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
TRAV18A0A075B6X5 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
TRAV18A0A075B6X5 FRMD8P1-201ENST00000440433 1524 ntBASIC14.69□□□□□ -0.06
TRAV18A0A075B6X5 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRAV18A0A075B6X5 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRAV18A0A075B6X5 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRAV18A0A075B6X5 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRAV18A0A075B6X5 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRAV18A0A075B6X5 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
TRAV18A0A075B6X5 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
TRAV18A0A075B6X5 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
TRAV18A0A075B6X5 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRAV18A0A075B6X5 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
TRAV18A0A075B6X5 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
TRAV18A0A075B6X5 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRAV18A0A075B6X5 AL353692.3-201ENST00000407031 1396 ntBASIC14.69□□□□□ -0.06
TRAV18A0A075B6X5 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
TRAV18A0A075B6X5 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC14.69□□□□□ -0.06
TRAV18A0A075B6X5 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
TRAV18A0A075B6X5 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRAV18A0A075B6X5 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
TRAV18A0A075B6X5 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRAV18A0A075B6X5 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRAV18A0A075B6X5 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC14.69□□□□□ -0.06
TRAV18A0A075B6X5 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRAV18A0A075B6X5 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC14.69□□□□□ -0.06
TRAV18A0A075B6X5 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRAV18A0A075B6X5 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRAV18A0A075B6X5 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC14.69□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 70 ms