Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC19.66■□□□□ 0.74
CTDP1Q9Y5B0 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
CTDP1Q9Y5B0 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
CTDP1Q9Y5B0 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CTDP1Q9Y5B0 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC19.66■□□□□ 0.74
CTDP1Q9Y5B0 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CTDP1Q9Y5B0 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
CTDP1Q9Y5B0 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CTDP1Q9Y5B0 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC19.66■□□□□ 0.74
CTDP1Q9Y5B0 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
CTDP1Q9Y5B0 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CTDP1Q9Y5B0 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC19.65■□□□□ 0.74
CTDP1Q9Y5B0 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC19.65■□□□□ 0.74
CTDP1Q9Y5B0 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CTDP1Q9Y5B0 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC19.65■□□□□ 0.74
CTDP1Q9Y5B0 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CTDP1Q9Y5B0 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
CTDP1Q9Y5B0 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CTDP1Q9Y5B0 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CTDP1Q9Y5B0 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC19.65■□□□□ 0.74
CTDP1Q9Y5B0 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC19.65■□□□□ 0.74
CTDP1Q9Y5B0 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC19.65■□□□□ 0.74
CTDP1Q9Y5B0 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
CTDP1Q9Y5B0 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC19.65■□□□□ 0.74
CTDP1Q9Y5B0 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC19.65■□□□□ 0.74
CTDP1Q9Y5B0 RPL28-209ENST00000560055 670 ntTSL 3 BASIC19.65■□□□□ 0.74
CTDP1Q9Y5B0 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
CTDP1Q9Y5B0 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC19.65■□□□□ 0.74
CTDP1Q9Y5B0 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC19.65■□□□□ 0.74
CTDP1Q9Y5B0 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC19.65■□□□□ 0.74
CTDP1Q9Y5B0 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC19.65■□□□□ 0.74
CTDP1Q9Y5B0 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC19.65■□□□□ 0.74
CTDP1Q9Y5B0 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
CTDP1Q9Y5B0 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.74
CTDP1Q9Y5B0 FLJ16779-201ENST00000612722 7638 ntBASIC19.64■□□□□ 0.74
CTDP1Q9Y5B0 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC19.64■□□□□ 0.74
CTDP1Q9Y5B0 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
CTDP1Q9Y5B0 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CTDP1Q9Y5B0 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
CTDP1Q9Y5B0 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CTDP1Q9Y5B0 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CTDP1Q9Y5B0 AL645939.2-201ENST00000427340 991 ntBASIC19.64■□□□□ 0.73
CTDP1Q9Y5B0 TIMM8BP1-201ENST00000452384 211 ntBASIC19.64■□□□□ 0.73
CTDP1Q9Y5B0 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC19.64■□□□□ 0.73
CTDP1Q9Y5B0 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC19.64■□□□□ 0.73
CTDP1Q9Y5B0 AC107918.2-201ENST00000530817 355 ntBASIC19.64■□□□□ 0.73
CTDP1Q9Y5B0 AC005412.3-201ENST00000580309 715 ntBASIC19.64■□□□□ 0.73
CTDP1Q9Y5B0 MIR4515-201ENST00000584082 81 ntBASIC19.64■□□□□ 0.73
CTDP1Q9Y5B0 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CTDP1Q9Y5B0 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CTDP1Q9Y5B0 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CTDP1Q9Y5B0 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC19.64■□□□□ 0.73
CTDP1Q9Y5B0 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CTDP1Q9Y5B0 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
CTDP1Q9Y5B0 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
CTDP1Q9Y5B0 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CTDP1Q9Y5B0 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CTDP1Q9Y5B0 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CTDP1Q9Y5B0 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CTDP1Q9Y5B0 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC19.64■□□□□ 0.73
CTDP1Q9Y5B0 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CTDP1Q9Y5B0 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
CTDP1Q9Y5B0 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC19.63■□□□□ 0.73
CTDP1Q9Y5B0 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CTDP1Q9Y5B0 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CTDP1Q9Y5B0 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CTDP1Q9Y5B0 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC19.63■□□□□ 0.73
CTDP1Q9Y5B0 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
CTDP1Q9Y5B0 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
CTDP1Q9Y5B0 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
CTDP1Q9Y5B0 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CTDP1Q9Y5B0 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CTDP1Q9Y5B0 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CTDP1Q9Y5B0 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CTDP1Q9Y5B0 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC19.63■□□□□ 0.73
CTDP1Q9Y5B0 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC19.63■□□□□ 0.73
CTDP1Q9Y5B0 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC19.63■□□□□ 0.73
CTDP1Q9Y5B0 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
CTDP1Q9Y5B0 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC19.63■□□□□ 0.73
CTDP1Q9Y5B0 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC19.63■□□□□ 0.73
CTDP1Q9Y5B0 PNMT-202ENST00000394246 821 ntTSL 2 BASIC19.63■□□□□ 0.73
CTDP1Q9Y5B0 TSEN15P1-201ENST00000423257 515 ntBASIC19.63■□□□□ 0.73
CTDP1Q9Y5B0 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC19.63■□□□□ 0.73
CTDP1Q9Y5B0 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
CTDP1Q9Y5B0 GATB-205ENST00000508611 605 ntTSL 2 BASIC19.63■□□□□ 0.73
CTDP1Q9Y5B0 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC19.63■□□□□ 0.73
CTDP1Q9Y5B0 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC19.63■□□□□ 0.73
CTDP1Q9Y5B0 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
CTDP1Q9Y5B0 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC19.63■□□□□ 0.73
CTDP1Q9Y5B0 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC19.63■□□□□ 0.73
CTDP1Q9Y5B0 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC19.63■□□□□ 0.73
CTDP1Q9Y5B0 AC105339.1-204ENST00000636249 355 ntBASIC19.63■□□□□ 0.73
CTDP1Q9Y5B0 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
CTDP1Q9Y5B0 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CTDP1Q9Y5B0 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
CTDP1Q9Y5B0 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CTDP1Q9Y5B0 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
CTDP1Q9Y5B0 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
CTDP1Q9Y5B0 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CTDP1Q9Y5B0 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms