Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC18.34■□□□□ 0.53
SSX2IPQ9Y2D8 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC18.34■□□□□ 0.53
SSX2IPQ9Y2D8 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SSX2IPQ9Y2D8 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC18.34■□□□□ 0.53
SSX2IPQ9Y2D8 LINC01451-201ENST00000623792 534 ntBASIC18.34■□□□□ 0.53
SSX2IPQ9Y2D8 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
SSX2IPQ9Y2D8 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
SSX2IPQ9Y2D8 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
SSX2IPQ9Y2D8 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SSX2IPQ9Y2D8 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC18.34■□□□□ 0.53
SSX2IPQ9Y2D8 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
SSX2IPQ9Y2D8 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SSX2IPQ9Y2D8 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC18.34■□□□□ 0.53
SSX2IPQ9Y2D8 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
SSX2IPQ9Y2D8 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
SSX2IPQ9Y2D8 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
SSX2IPQ9Y2D8 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
SSX2IPQ9Y2D8 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
SSX2IPQ9Y2D8 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SSX2IPQ9Y2D8 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
SSX2IPQ9Y2D8 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
SSX2IPQ9Y2D8 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
SSX2IPQ9Y2D8 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC18.33■□□□□ 0.53
SSX2IPQ9Y2D8 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SSX2IPQ9Y2D8 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SSX2IPQ9Y2D8 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
SSX2IPQ9Y2D8 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SSX2IPQ9Y2D8 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SSX2IPQ9Y2D8 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
SSX2IPQ9Y2D8 AC129492.6-201ENST00000611383 1305 ntBASIC18.33■□□□□ 0.53
SSX2IPQ9Y2D8 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
SSX2IPQ9Y2D8 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC18.33■□□□□ 0.52
SSX2IPQ9Y2D8 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC18.33■□□□□ 0.52
SSX2IPQ9Y2D8 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
SSX2IPQ9Y2D8 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SSX2IPQ9Y2D8 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC18.33■□□□□ 0.52
SSX2IPQ9Y2D8 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC18.33■□□□□ 0.52
SSX2IPQ9Y2D8 AC091812.2-201ENST00000619081 385 ntBASIC18.33■□□□□ 0.52
SSX2IPQ9Y2D8 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SSX2IPQ9Y2D8 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
SSX2IPQ9Y2D8 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SSX2IPQ9Y2D8 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC18.33■□□□□ 0.52
SSX2IPQ9Y2D8 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SSX2IPQ9Y2D8 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC18.33■□□□□ 0.52
SSX2IPQ9Y2D8 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
SSX2IPQ9Y2D8 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
SSX2IPQ9Y2D8 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
SSX2IPQ9Y2D8 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SSX2IPQ9Y2D8 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC18.33■□□□□ 0.52
SSX2IPQ9Y2D8 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
SSX2IPQ9Y2D8 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SSX2IPQ9Y2D8 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SSX2IPQ9Y2D8 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SSX2IPQ9Y2D8 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC18.33■□□□□ 0.52
SSX2IPQ9Y2D8 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC18.33■□□□□ 0.52
SSX2IPQ9Y2D8 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
SSX2IPQ9Y2D8 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC18.32■□□□□ 0.52
SSX2IPQ9Y2D8 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SSX2IPQ9Y2D8 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SSX2IPQ9Y2D8 AL135999.2-201ENST00000622438 1686 ntBASIC18.32■□□□□ 0.52
SSX2IPQ9Y2D8 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC18.32■□□□□ 0.52
SSX2IPQ9Y2D8 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC18.32■□□□□ 0.52
SSX2IPQ9Y2D8 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SSX2IPQ9Y2D8 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SSX2IPQ9Y2D8 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SSX2IPQ9Y2D8 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SSX2IPQ9Y2D8 AL513480.1-201ENST00000451731 511 ntBASIC18.32■□□□□ 0.52
SSX2IPQ9Y2D8 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC18.32■□□□□ 0.52
SSX2IPQ9Y2D8 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
SSX2IPQ9Y2D8 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC18.32■□□□□ 0.52
SSX2IPQ9Y2D8 AC004835.2-201ENST00000603762 682 ntBASIC18.32■□□□□ 0.52
SSX2IPQ9Y2D8 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
SSX2IPQ9Y2D8 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SSX2IPQ9Y2D8 GATB-213ENST00000515812 1893 ntTSL 5 BASIC18.32■□□□□ 0.52
SSX2IPQ9Y2D8 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC18.32■□□□□ 0.52
SSX2IPQ9Y2D8 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC18.32■□□□□ 0.52
SSX2IPQ9Y2D8 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC18.32■□□□□ 0.52
SSX2IPQ9Y2D8 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SSX2IPQ9Y2D8 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SSX2IPQ9Y2D8 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC18.32■□□□□ 0.52
SSX2IPQ9Y2D8 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SSX2IPQ9Y2D8 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SSX2IPQ9Y2D8 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SSX2IPQ9Y2D8 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
SSX2IPQ9Y2D8 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SSX2IPQ9Y2D8 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SSX2IPQ9Y2D8 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SSX2IPQ9Y2D8 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
SSX2IPQ9Y2D8 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
SSX2IPQ9Y2D8 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
SSX2IPQ9Y2D8 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC18.31■□□□□ 0.52
SSX2IPQ9Y2D8 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SSX2IPQ9Y2D8 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SSX2IPQ9Y2D8 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
SSX2IPQ9Y2D8 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SSX2IPQ9Y2D8 AC008764.6-201ENST00000595909 2069 ntBASIC18.31■□□□□ 0.52
SSX2IPQ9Y2D8 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC18.31■□□□□ 0.52
SSX2IPQ9Y2D8 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
SSX2IPQ9Y2D8 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SSX2IPQ9Y2D8 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 56.5 ms