Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
NPIPA1Q9UND3 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
NPIPA1Q9UND3 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
NPIPA1Q9UND3 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC15.76■□□□□ 0.11
NPIPA1Q9UND3 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC15.76■□□□□ 0.11
NPIPA1Q9UND3 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC15.76■□□□□ 0.11
NPIPA1Q9UND3 COA5-202ENST00000409997 557 ntTSL 4 BASIC15.76■□□□□ 0.11
NPIPA1Q9UND3 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC15.76■□□□□ 0.11
NPIPA1Q9UND3 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC15.76■□□□□ 0.11
NPIPA1Q9UND3 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC15.76■□□□□ 0.11
NPIPA1Q9UND3 IGHV3-65-201ENST00000523210 341 ntBASIC15.76■□□□□ 0.11
NPIPA1Q9UND3 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
NPIPA1Q9UND3 AC018845.2-201ENST00000568326 409 ntBASIC15.76■□□□□ 0.11
NPIPA1Q9UND3 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC15.76■□□□□ 0.11
NPIPA1Q9UND3 AP001160.2-201ENST00000596071 487 ntBASIC15.76■□□□□ 0.11
NPIPA1Q9UND3 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC15.76■□□□□ 0.11
NPIPA1Q9UND3 AC008667.4-201ENST00000607370 168 ntBASIC15.76■□□□□ 0.11
NPIPA1Q9UND3 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
NPIPA1Q9UND3 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
NPIPA1Q9UND3 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
NPIPA1Q9UND3 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
NPIPA1Q9UND3 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC15.76■□□□□ 0.11
NPIPA1Q9UND3 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC15.76■□□□□ 0.11
NPIPA1Q9UND3 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
NPIPA1Q9UND3 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
NPIPA1Q9UND3 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
NPIPA1Q9UND3 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC15.76■□□□□ 0.11
NPIPA1Q9UND3 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
NPIPA1Q9UND3 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
NPIPA1Q9UND3 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
NPIPA1Q9UND3 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.11
NPIPA1Q9UND3 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
NPIPA1Q9UND3 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
NPIPA1Q9UND3 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC15.75■□□□□ 0.11
NPIPA1Q9UND3 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC15.75■□□□□ 0.11
NPIPA1Q9UND3 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC15.75■□□□□ 0.11
NPIPA1Q9UND3 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
NPIPA1Q9UND3 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
NPIPA1Q9UND3 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC15.75■□□□□ 0.11
NPIPA1Q9UND3 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC15.75■□□□□ 0.11
NPIPA1Q9UND3 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
NPIPA1Q9UND3 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
NPIPA1Q9UND3 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
NPIPA1Q9UND3 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
NPIPA1Q9UND3 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC15.75■□□□□ 0.11
NPIPA1Q9UND3 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
NPIPA1Q9UND3 CROCCP2-202ENST00000412962 2773 ntBASIC15.75■□□□□ 0.11
NPIPA1Q9UND3 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
NPIPA1Q9UND3 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC15.75■□□□□ 0.11
NPIPA1Q9UND3 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC15.75■□□□□ 0.11
NPIPA1Q9UND3 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC15.75■□□□□ 0.11
NPIPA1Q9UND3 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC15.75■□□□□ 0.11
NPIPA1Q9UND3 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC15.75■□□□□ 0.11
NPIPA1Q9UND3 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
NPIPA1Q9UND3 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
NPIPA1Q9UND3 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
NPIPA1Q9UND3 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
NPIPA1Q9UND3 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
NPIPA1Q9UND3 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
NPIPA1Q9UND3 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
NPIPA1Q9UND3 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
NPIPA1Q9UND3 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC15.75■□□□□ 0.11
NPIPA1Q9UND3 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
NPIPA1Q9UND3 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
NPIPA1Q9UND3 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC15.75■□□□□ 0.11
NPIPA1Q9UND3 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
NPIPA1Q9UND3 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
NPIPA1Q9UND3 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
NPIPA1Q9UND3 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC15.75■□□□□ 0.11
NPIPA1Q9UND3 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
NPIPA1Q9UND3 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
NPIPA1Q9UND3 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC15.75■□□□□ 0.11
NPIPA1Q9UND3 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC15.75■□□□□ 0.11
NPIPA1Q9UND3 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC15.75■□□□□ 0.11
NPIPA1Q9UND3 AC009336.1-201ENST00000608941 1553 ntBASIC15.75■□□□□ 0.11
NPIPA1Q9UND3 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
NPIPA1Q9UND3 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
NPIPA1Q9UND3 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
NPIPA1Q9UND3 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
NPIPA1Q9UND3 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
NPIPA1Q9UND3 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
NPIPA1Q9UND3 AC106820.2-201ENST00000563775 3264 ntBASIC15.74■□□□□ 0.11
NPIPA1Q9UND3 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
NPIPA1Q9UND3 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
NPIPA1Q9UND3 AL645608.8-201ENST00000606034 2086 ntBASIC15.74■□□□□ 0.11
NPIPA1Q9UND3 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
NPIPA1Q9UND3 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
NPIPA1Q9UND3 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
NPIPA1Q9UND3 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
NPIPA1Q9UND3 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
NPIPA1Q9UND3 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
NPIPA1Q9UND3 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
NPIPA1Q9UND3 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC15.74■□□□□ 0.11
NPIPA1Q9UND3 AC211486.1-202ENST00000416371 468 ntBASIC15.74■□□□□ 0.11
NPIPA1Q9UND3 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC15.74■□□□□ 0.11
NPIPA1Q9UND3 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
NPIPA1Q9UND3 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC15.74■□□□□ 0.11
NPIPA1Q9UND3 AC002558.1-201ENST00000488906 803 ntBASIC15.74■□□□□ 0.11
NPIPA1Q9UND3 AC211476.1-201ENST00000503899 468 ntBASIC15.74■□□□□ 0.11
NPIPA1Q9UND3 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC15.74■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms