Protein–RNA interactions for Protein: Q9UH73

EBF1, Transcription factor COE1, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF1Q9UH73 CYB561-216ENST00000582297 897 ntTSL 3 BASIC17.37■□□□□ 0.37
EBF1Q9UH73 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC17.37■□□□□ 0.37
EBF1Q9UH73 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC17.37■□□□□ 0.37
EBF1Q9UH73 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
EBF1Q9UH73 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC17.37■□□□□ 0.37
EBF1Q9UH73 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
EBF1Q9UH73 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
EBF1Q9UH73 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
EBF1Q9UH73 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
EBF1Q9UH73 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
EBF1Q9UH73 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
EBF1Q9UH73 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
EBF1Q9UH73 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
EBF1Q9UH73 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
EBF1Q9UH73 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
EBF1Q9UH73 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
EBF1Q9UH73 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
EBF1Q9UH73 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
EBF1Q9UH73 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
EBF1Q9UH73 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
EBF1Q9UH73 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC17.37■□□□□ 0.37
EBF1Q9UH73 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
EBF1Q9UH73 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC17.36■□□□□ 0.37
EBF1Q9UH73 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
EBF1Q9UH73 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
EBF1Q9UH73 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
EBF1Q9UH73 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC17.36■□□□□ 0.37
EBF1Q9UH73 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
EBF1Q9UH73 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC17.36■□□□□ 0.37
EBF1Q9UH73 AC018695.7-201ENST00000624587 2492 ntBASIC17.36■□□□□ 0.37
EBF1Q9UH73 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC17.36■□□□□ 0.37
EBF1Q9UH73 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
EBF1Q9UH73 CD99-202ENST00000381180 530 ntTSL 2 BASIC17.36■□□□□ 0.37
EBF1Q9UH73 PAWRP1-201ENST00000451083 565 ntBASIC17.36■□□□□ 0.37
EBF1Q9UH73 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC17.36■□□□□ 0.37
EBF1Q9UH73 AC112191.1-201ENST00000523689 701 ntBASIC17.36■□□□□ 0.37
EBF1Q9UH73 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
EBF1Q9UH73 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
EBF1Q9UH73 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC17.36■□□□□ 0.37
EBF1Q9UH73 NF2-208ENST00000403435 2568 ntTSL 5 BASIC17.36■□□□□ 0.37
EBF1Q9UH73 AC046158.3-201ENST00000624947 2558 ntBASIC17.36■□□□□ 0.37
EBF1Q9UH73 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
EBF1Q9UH73 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC17.36■□□□□ 0.37
EBF1Q9UH73 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
EBF1Q9UH73 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
EBF1Q9UH73 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
EBF1Q9UH73 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC17.36■□□□□ 0.37
EBF1Q9UH73 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
EBF1Q9UH73 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
EBF1Q9UH73 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
EBF1Q9UH73 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC17.36■□□□□ 0.37
EBF1Q9UH73 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
EBF1Q9UH73 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
EBF1Q9UH73 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
EBF1Q9UH73 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC17.36■□□□□ 0.37
EBF1Q9UH73 KRT18P55-202ENST00000578578 1546 ntBASIC17.36■□□□□ 0.37
EBF1Q9UH73 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
EBF1Q9UH73 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
EBF1Q9UH73 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC17.36■□□□□ 0.37
EBF1Q9UH73 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
EBF1Q9UH73 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
EBF1Q9UH73 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC17.35■□□□□ 0.37
EBF1Q9UH73 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC17.35■□□□□ 0.37
EBF1Q9UH73 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
EBF1Q9UH73 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
EBF1Q9UH73 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
EBF1Q9UH73 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
EBF1Q9UH73 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
EBF1Q9UH73 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
EBF1Q9UH73 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
EBF1Q9UH73 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
EBF1Q9UH73 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
EBF1Q9UH73 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
EBF1Q9UH73 AC015911.4-201ENST00000588022 1070 ntBASIC17.35■□□□□ 0.37
EBF1Q9UH73 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC17.35■□□□□ 0.37
EBF1Q9UH73 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
EBF1Q9UH73 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC17.35■□□□□ 0.37
EBF1Q9UH73 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
EBF1Q9UH73 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
EBF1Q9UH73 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC17.35■□□□□ 0.37
EBF1Q9UH73 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
EBF1Q9UH73 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC17.35■□□□□ 0.37
EBF1Q9UH73 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
EBF1Q9UH73 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
EBF1Q9UH73 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
EBF1Q9UH73 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
EBF1Q9UH73 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
EBF1Q9UH73 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC17.34■□□□□ 0.37
EBF1Q9UH73 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
EBF1Q9UH73 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
EBF1Q9UH73 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
EBF1Q9UH73 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
EBF1Q9UH73 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
EBF1Q9UH73 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
EBF1Q9UH73 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
EBF1Q9UH73 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
EBF1Q9UH73 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
EBF1Q9UH73 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
EBF1Q9UH73 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
EBF1Q9UH73 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms