Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC19.15■□□□□ 0.66
COL20A1Q9P218 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
COL20A1Q9P218 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
COL20A1Q9P218 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
COL20A1Q9P218 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
COL20A1Q9P218 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
COL20A1Q9P218 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
COL20A1Q9P218 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
COL20A1Q9P218 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
COL20A1Q9P218 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
COL20A1Q9P218 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC19.15■□□□□ 0.66
COL20A1Q9P218 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC19.15■□□□□ 0.66
COL20A1Q9P218 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC19.15■□□□□ 0.66
COL20A1Q9P218 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
COL20A1Q9P218 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
COL20A1Q9P218 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC19.15■□□□□ 0.66
COL20A1Q9P218 LINC01225-203ENST00000563550 1244 ntBASIC19.15■□□□□ 0.66
COL20A1Q9P218 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC19.15■□□□□ 0.66
COL20A1Q9P218 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
COL20A1Q9P218 AC106028.4-201ENST00000614509 607 ntBASIC19.15■□□□□ 0.66
COL20A1Q9P218 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
COL20A1Q9P218 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
COL20A1Q9P218 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
COL20A1Q9P218 AL021920.2-201ENST00000624828 1351 ntBASIC19.15■□□□□ 0.66
COL20A1Q9P218 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC19.15■□□□□ 0.66
COL20A1Q9P218 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
COL20A1Q9P218 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
COL20A1Q9P218 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC19.15■□□□□ 0.66
COL20A1Q9P218 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
COL20A1Q9P218 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC19.15■□□□□ 0.66
COL20A1Q9P218 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
COL20A1Q9P218 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
COL20A1Q9P218 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
COL20A1Q9P218 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.66
COL20A1Q9P218 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
COL20A1Q9P218 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
COL20A1Q9P218 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
COL20A1Q9P218 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
COL20A1Q9P218 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
COL20A1Q9P218 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC19.14■□□□□ 0.65
COL20A1Q9P218 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
COL20A1Q9P218 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
COL20A1Q9P218 AL592309.1-201ENST00000443127 649 ntBASIC19.14■□□□□ 0.65
COL20A1Q9P218 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC19.14■□□□□ 0.65
COL20A1Q9P218 DAD1-205ENST00000543337 501 ntTSL 3 BASIC19.14■□□□□ 0.65
COL20A1Q9P218 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC19.14■□□□□ 0.65
COL20A1Q9P218 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
COL20A1Q9P218 AC009093.7-201ENST00000623853 1223 ntBASIC19.14■□□□□ 0.65
COL20A1Q9P218 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
COL20A1Q9P218 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC19.14■□□□□ 0.65
COL20A1Q9P218 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
COL20A1Q9P218 AKAP8P1-201ENST00000434743 1349 ntBASIC19.14■□□□□ 0.65
COL20A1Q9P218 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
COL20A1Q9P218 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
COL20A1Q9P218 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
COL20A1Q9P218 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
COL20A1Q9P218 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
COL20A1Q9P218 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
COL20A1Q9P218 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
COL20A1Q9P218 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
COL20A1Q9P218 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
COL20A1Q9P218 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC19.14■□□□□ 0.65
COL20A1Q9P218 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
COL20A1Q9P218 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
COL20A1Q9P218 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
COL20A1Q9P218 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
COL20A1Q9P218 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
COL20A1Q9P218 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
COL20A1Q9P218 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
COL20A1Q9P218 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC19.13■□□□□ 0.65
COL20A1Q9P218 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC19.13■□□□□ 0.65
COL20A1Q9P218 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC19.13■□□□□ 0.65
COL20A1Q9P218 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC19.13■□□□□ 0.65
COL20A1Q9P218 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
COL20A1Q9P218 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
COL20A1Q9P218 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC19.13■□□□□ 0.65
COL20A1Q9P218 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC19.13■□□□□ 0.65
COL20A1Q9P218 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
COL20A1Q9P218 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
COL20A1Q9P218 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC19.13■□□□□ 0.65
COL20A1Q9P218 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
COL20A1Q9P218 AL161645.1-201ENST00000622716 1255 ntBASIC19.13■□□□□ 0.65
COL20A1Q9P218 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC19.13■□□□□ 0.65
COL20A1Q9P218 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC19.13■□□□□ 0.65
COL20A1Q9P218 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
COL20A1Q9P218 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
COL20A1Q9P218 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
COL20A1Q9P218 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
COL20A1Q9P218 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC19.13■□□□□ 0.65
COL20A1Q9P218 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
COL20A1Q9P218 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
COL20A1Q9P218 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
COL20A1Q9P218 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
COL20A1Q9P218 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
COL20A1Q9P218 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
COL20A1Q9P218 AC005332.8-201ENST00000622750 2735 ntBASIC19.12■□□□□ 0.65
COL20A1Q9P218 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
COL20A1Q9P218 PCDHB18P-201ENST00000524813 2368 ntBASIC19.12■□□□□ 0.65
COL20A1Q9P218 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
COL20A1Q9P218 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC19.12■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms