Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SSU72Q9NP77 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SSU72Q9NP77 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
SSU72Q9NP77 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SSU72Q9NP77 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC16.93■□□□□ 0.3
SSU72Q9NP77 AC092384.3-202ENST00000564646 2873 ntBASIC16.93■□□□□ 0.3
SSU72Q9NP77 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SSU72Q9NP77 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC16.93■□□□□ 0.3
SSU72Q9NP77 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SSU72Q9NP77 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC16.93■□□□□ 0.3
SSU72Q9NP77 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SSU72Q9NP77 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SSU72Q9NP77 AL603832.2-201ENST00000566195 2125 ntBASIC16.93■□□□□ 0.3
SSU72Q9NP77 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
SSU72Q9NP77 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
SSU72Q9NP77 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
SSU72Q9NP77 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
SSU72Q9NP77 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SSU72Q9NP77 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SSU72Q9NP77 GCK-202ENST00000345378 2421 ntTSL 2 BASIC16.92■□□□□ 0.3
SSU72Q9NP77 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC16.92■□□□□ 0.3
SSU72Q9NP77 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC16.92■□□□□ 0.3
SSU72Q9NP77 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SSU72Q9NP77 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SSU72Q9NP77 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SSU72Q9NP77 AC002310.6-201ENST00000624451 1377 ntBASIC16.92■□□□□ 0.3
SSU72Q9NP77 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SSU72Q9NP77 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC16.92■□□□□ 0.3
SSU72Q9NP77 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SSU72Q9NP77 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SSU72Q9NP77 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC16.92■□□□□ 0.3
SSU72Q9NP77 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
SSU72Q9NP77 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SSU72Q9NP77 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
SSU72Q9NP77 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SSU72Q9NP77 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
SSU72Q9NP77 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
SSU72Q9NP77 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC16.92■□□□□ 0.3
SSU72Q9NP77 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SSU72Q9NP77 MEG3-211ENST00000452514 461 ntTSL 3 BASIC16.92■□□□□ 0.3
SSU72Q9NP77 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC16.92■□□□□ 0.3
SSU72Q9NP77 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC16.92■□□□□ 0.3
SSU72Q9NP77 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SSU72Q9NP77 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC16.92■□□□□ 0.3
SSU72Q9NP77 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC16.92■□□□□ 0.3
SSU72Q9NP77 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC16.92■□□□□ 0.3
SSU72Q9NP77 AP006294.2-201ENST00000641667 209 ntBASIC16.92■□□□□ 0.3
SSU72Q9NP77 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SSU72Q9NP77 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SSU72Q9NP77 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC16.92■□□□□ 0.3
SSU72Q9NP77 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC16.92■□□□□ 0.3
SSU72Q9NP77 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SSU72Q9NP77 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SSU72Q9NP77 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SSU72Q9NP77 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SSU72Q9NP77 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SSU72Q9NP77 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC16.92■□□□□ 0.3
SSU72Q9NP77 UBC-206ENST00000538617 1303 ntTSL 5 BASIC16.92■□□□□ 0.3
SSU72Q9NP77 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
SSU72Q9NP77 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC16.92■□□□□ 0.3
SSU72Q9NP77 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SSU72Q9NP77 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC16.92■□□□□ 0.3
SSU72Q9NP77 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SSU72Q9NP77 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SSU72Q9NP77 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC16.92■□□□□ 0.3
SSU72Q9NP77 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
SSU72Q9NP77 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SSU72Q9NP77 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC16.91■□□□□ 0.3
SSU72Q9NP77 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SSU72Q9NP77 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC16.91■□□□□ 0.3
SSU72Q9NP77 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC16.91■□□□□ 0.3
SSU72Q9NP77 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SSU72Q9NP77 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SSU72Q9NP77 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SSU72Q9NP77 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
SSU72Q9NP77 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC16.91■□□□□ 0.3
SSU72Q9NP77 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC16.91■□□□□ 0.3
SSU72Q9NP77 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SSU72Q9NP77 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SSU72Q9NP77 AP002414.1-201ENST00000391405 1147 ntBASIC16.91■□□□□ 0.3
SSU72Q9NP77 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC16.91■□□□□ 0.3
SSU72Q9NP77 DANCR-204ENST00000444958 709 ntTSL 3 BASIC16.91■□□□□ 0.3
SSU72Q9NP77 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC16.91■□□□□ 0.3
SSU72Q9NP77 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SSU72Q9NP77 VENTXP5-201ENST00000523979 775 ntBASIC16.91■□□□□ 0.3
SSU72Q9NP77 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
SSU72Q9NP77 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SSU72Q9NP77 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC16.91■□□□□ 0.3
SSU72Q9NP77 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC16.91■□□□□ 0.3
SSU72Q9NP77 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
SSU72Q9NP77 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC16.91■□□□□ 0.3
SSU72Q9NP77 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC16.91■□□□□ 0.3
SSU72Q9NP77 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SSU72Q9NP77 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
SSU72Q9NP77 PAUPAR-201ENST00000630360 2965 ntBASIC16.91■□□□□ 0.3
SSU72Q9NP77 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SSU72Q9NP77 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SSU72Q9NP77 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC16.91■□□□□ 0.3
SSU72Q9NP77 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
SSU72Q9NP77 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms