Protein–RNA interactions for Protein: Q9HC58

SLC24A3, Sodium/potassium/calcium exchanger 3, humanhuman

Predictions only

Length 644 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC24A3Q9HC58 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC16.78■□□□□ 0.28
SLC24A3Q9HC58 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SLC24A3Q9HC58 AC116407.4-201ENST00000623319 1061 ntBASIC16.78■□□□□ 0.28
SLC24A3Q9HC58 AC083906.6-201ENST00000641366 219 ntBASIC16.78■□□□□ 0.28
SLC24A3Q9HC58 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SLC24A3Q9HC58 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SLC24A3Q9HC58 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SLC24A3Q9HC58 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SLC24A3Q9HC58 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
SLC24A3Q9HC58 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC16.78■□□□□ 0.28
SLC24A3Q9HC58 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC16.78■□□□□ 0.28
SLC24A3Q9HC58 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SLC24A3Q9HC58 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
SLC24A3Q9HC58 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SLC24A3Q9HC58 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC16.78■□□□□ 0.28
SLC24A3Q9HC58 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SLC24A3Q9HC58 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SLC24A3Q9HC58 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC16.77■□□□□ 0.28
SLC24A3Q9HC58 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SLC24A3Q9HC58 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC16.77■□□□□ 0.28
SLC24A3Q9HC58 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
SLC24A3Q9HC58 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC16.77■□□□□ 0.28
SLC24A3Q9HC58 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
SLC24A3Q9HC58 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC16.77■□□□□ 0.28
SLC24A3Q9HC58 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC16.77■□□□□ 0.28
SLC24A3Q9HC58 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC16.77■□□□□ 0.28
SLC24A3Q9HC58 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
SLC24A3Q9HC58 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SLC24A3Q9HC58 AL357833.2-202ENST00000413757 372 ntTSL 3 BASIC16.77■□□□□ 0.28
SLC24A3Q9HC58 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
SLC24A3Q9HC58 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
SLC24A3Q9HC58 PRSS44-201ENST00000515154 1146 ntBASIC16.77■□□□□ 0.28
SLC24A3Q9HC58 VENTXP5-201ENST00000523979 775 ntBASIC16.77■□□□□ 0.28
SLC24A3Q9HC58 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC16.77■□□□□ 0.28
SLC24A3Q9HC58 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC16.77■□□□□ 0.28
SLC24A3Q9HC58 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SLC24A3Q9HC58 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC16.77■□□□□ 0.28
SLC24A3Q9HC58 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
SLC24A3Q9HC58 AC093458.2-201ENST00000623150 629 ntBASIC16.77■□□□□ 0.28
SLC24A3Q9HC58 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC16.77■□□□□ 0.28
SLC24A3Q9HC58 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC16.77■□□□□ 0.27
SLC24A3Q9HC58 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
SLC24A3Q9HC58 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
SLC24A3Q9HC58 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
SLC24A3Q9HC58 AC008556.1-201ENST00000610908 2040 ntBASIC16.77■□□□□ 0.27
SLC24A3Q9HC58 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
SLC24A3Q9HC58 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
SLC24A3Q9HC58 AC015656.1-201ENST00000624209 3578 ntBASIC16.77■□□□□ 0.27
SLC24A3Q9HC58 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC16.77■□□□□ 0.27
SLC24A3Q9HC58 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
SLC24A3Q9HC58 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC16.77■□□□□ 0.27
SLC24A3Q9HC58 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SLC24A3Q9HC58 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
SLC24A3Q9HC58 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SLC24A3Q9HC58 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
SLC24A3Q9HC58 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SLC24A3Q9HC58 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC16.76■□□□□ 0.27
SLC24A3Q9HC58 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
SLC24A3Q9HC58 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
SLC24A3Q9HC58 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SLC24A3Q9HC58 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SLC24A3Q9HC58 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
SLC24A3Q9HC58 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC16.76■□□□□ 0.27
SLC24A3Q9HC58 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SLC24A3Q9HC58 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC16.76■□□□□ 0.27
SLC24A3Q9HC58 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
SLC24A3Q9HC58 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SLC24A3Q9HC58 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SLC24A3Q9HC58 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
SLC24A3Q9HC58 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC16.76■□□□□ 0.27
SLC24A3Q9HC58 AC126755.1-201ENST00000525846 6405 ntBASIC16.76■□□□□ 0.27
SLC24A3Q9HC58 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC16.76■□□□□ 0.27
SLC24A3Q9HC58 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SLC24A3Q9HC58 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SLC24A3Q9HC58 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SLC24A3Q9HC58 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SLC24A3Q9HC58 AL359075.1-203ENST00000462729 1002 ntBASIC16.76■□□□□ 0.27
SLC24A3Q9HC58 RGS1-203ENST00000469578 1034 ntTSL 2 BASIC16.76■□□□□ 0.27
SLC24A3Q9HC58 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC16.76■□□□□ 0.27
SLC24A3Q9HC58 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC16.76■□□□□ 0.27
SLC24A3Q9HC58 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC16.76■□□□□ 0.27
SLC24A3Q9HC58 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC16.76■□□□□ 0.27
SLC24A3Q9HC58 WDR88-203ENST00000592765 651 ntTSL 5 BASIC16.76■□□□□ 0.27
SLC24A3Q9HC58 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC16.76■□□□□ 0.27
SLC24A3Q9HC58 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SLC24A3Q9HC58 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SLC24A3Q9HC58 GSN-206ENST00000394353 2311 ntTSL 2 BASIC16.76■□□□□ 0.27
SLC24A3Q9HC58 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SLC24A3Q9HC58 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SLC24A3Q9HC58 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SLC24A3Q9HC58 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
SLC24A3Q9HC58 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
SLC24A3Q9HC58 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
SLC24A3Q9HC58 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
SLC24A3Q9HC58 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SLC24A3Q9HC58 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC16.75■□□□□ 0.27
SLC24A3Q9HC58 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC16.75■□□□□ 0.27
SLC24A3Q9HC58 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
SLC24A3Q9HC58 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
SLC24A3Q9HC58 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms