Protein–RNA interactions for Protein: Q9HC36

MRM3, rRNA methyltransferase 3, mitochondrial, humanhuman

Known RBP Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRM3Q9HC36 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC17.06■□□□□ 0.32
MRM3Q9HC36 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC17.06■□□□□ 0.32
MRM3Q9HC36 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
MRM3Q9HC36 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
MRM3Q9HC36 HLA-A-202ENST00000376806 1854 ntBASIC17.05■□□□□ 0.32
MRM3Q9HC36 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
MRM3Q9HC36 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
MRM3Q9HC36 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
MRM3Q9HC36 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
MRM3Q9HC36 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
MRM3Q9HC36 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
MRM3Q9HC36 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
MRM3Q9HC36 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
MRM3Q9HC36 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
MRM3Q9HC36 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
MRM3Q9HC36 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
MRM3Q9HC36 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
MRM3Q9HC36 IRF8-202ENST00000562492 946 ntTSL 3 BASIC17.05■□□□□ 0.32
MRM3Q9HC36 AF228730.7-201ENST00000641842 219 ntBASIC17.05■□□□□ 0.32
MRM3Q9HC36 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
MRM3Q9HC36 AL139011.1-202ENST00000642063 584 ntBASIC17.05■□□□□ 0.32
MRM3Q9HC36 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
MRM3Q9HC36 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
MRM3Q9HC36 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
MRM3Q9HC36 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC17.05■□□□□ 0.32
MRM3Q9HC36 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
MRM3Q9HC36 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
MRM3Q9HC36 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC17.05■□□□□ 0.32
MRM3Q9HC36 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC17.05■□□□□ 0.32
MRM3Q9HC36 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
MRM3Q9HC36 AL603756.1-201ENST00000606511 2163 ntBASIC17.05■□□□□ 0.32
MRM3Q9HC36 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
MRM3Q9HC36 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC17.05■□□□□ 0.32
MRM3Q9HC36 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
MRM3Q9HC36 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
MRM3Q9HC36 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
MRM3Q9HC36 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
MRM3Q9HC36 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
MRM3Q9HC36 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
MRM3Q9HC36 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
MRM3Q9HC36 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
MRM3Q9HC36 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC17.04■□□□□ 0.32
MRM3Q9HC36 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
MRM3Q9HC36 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
MRM3Q9HC36 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC17.04■□□□□ 0.32
MRM3Q9HC36 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC17.04■□□□□ 0.32
MRM3Q9HC36 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
MRM3Q9HC36 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC17.04■□□□□ 0.32
MRM3Q9HC36 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
MRM3Q9HC36 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC17.04■□□□□ 0.32
MRM3Q9HC36 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC17.04■□□□□ 0.32
MRM3Q9HC36 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
MRM3Q9HC36 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
MRM3Q9HC36 AC025062.2-201ENST00000605477 670 ntBASIC17.04■□□□□ 0.32
MRM3Q9HC36 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
MRM3Q9HC36 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
MRM3Q9HC36 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
MRM3Q9HC36 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
MRM3Q9HC36 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
MRM3Q9HC36 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC17.04■□□□□ 0.32
MRM3Q9HC36 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC17.04■□□□□ 0.32
MRM3Q9HC36 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
MRM3Q9HC36 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
MRM3Q9HC36 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC17.04■□□□□ 0.32
MRM3Q9HC36 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
MRM3Q9HC36 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
MRM3Q9HC36 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
MRM3Q9HC36 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
MRM3Q9HC36 TOP3BP1-201ENST00000420768 1380 ntBASIC17.03■□□□□ 0.32
MRM3Q9HC36 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
MRM3Q9HC36 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC17.03■□□□□ 0.32
MRM3Q9HC36 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
MRM3Q9HC36 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC17.03■□□□□ 0.32
MRM3Q9HC36 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
MRM3Q9HC36 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC17.03■□□□□ 0.32
MRM3Q9HC36 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC17.03■□□□□ 0.32
MRM3Q9HC36 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
MRM3Q9HC36 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
MRM3Q9HC36 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
MRM3Q9HC36 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
MRM3Q9HC36 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
MRM3Q9HC36 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC17.03■□□□□ 0.32
MRM3Q9HC36 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC17.03■□□□□ 0.32
MRM3Q9HC36 LAGE3P1-201ENST00000425356 484 ntBASIC17.03■□□□□ 0.32
MRM3Q9HC36 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC17.03■□□□□ 0.32
MRM3Q9HC36 AF238378.1-201ENST00000526806 358 ntBASIC17.03■□□□□ 0.32
MRM3Q9HC36 RN7SL510P-201ENST00000581311 263 ntBASIC17.03■□□□□ 0.32
MRM3Q9HC36 SDCCAG3P1-201ENST00000589292 1150 ntBASIC17.03■□□□□ 0.32
MRM3Q9HC36 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
MRM3Q9HC36 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
MRM3Q9HC36 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
MRM3Q9HC36 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC17.03■□□□□ 0.32
MRM3Q9HC36 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
MRM3Q9HC36 CA12-203ENST00000422263 2556 ntTSL 2 BASIC17.03■□□□□ 0.32
MRM3Q9HC36 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
MRM3Q9HC36 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
MRM3Q9HC36 AMT-206ENST00000458307 1860 ntTSL 2 BASIC17.03■□□□□ 0.32
MRM3Q9HC36 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
MRM3Q9HC36 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC17.03■□□□□ 0.32
MRM3Q9HC36 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC17.03■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms