Protein–RNA interactions for Protein: Q9HBL6

LRTM1, Leucine-rich repeat and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1Q9HBL6 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
LRTM1Q9HBL6 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC16.43■□□□□ 0.22
LRTM1Q9HBL6 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
LRTM1Q9HBL6 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
LRTM1Q9HBL6 CES3-203ENST00000543856 3178 ntTSL 2 BASIC16.43■□□□□ 0.22
LRTM1Q9HBL6 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC16.43■□□□□ 0.22
LRTM1Q9HBL6 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
LRTM1Q9HBL6 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
LRTM1Q9HBL6 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
LRTM1Q9HBL6 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC16.43■□□□□ 0.22
LRTM1Q9HBL6 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
LRTM1Q9HBL6 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
LRTM1Q9HBL6 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC16.43■□□□□ 0.22
LRTM1Q9HBL6 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
LRTM1Q9HBL6 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC16.43■□□□□ 0.22
LRTM1Q9HBL6 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
LRTM1Q9HBL6 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC16.42■□□□□ 0.22
LRTM1Q9HBL6 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC16.42■□□□□ 0.22
LRTM1Q9HBL6 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC16.42■□□□□ 0.22
LRTM1Q9HBL6 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
LRTM1Q9HBL6 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
LRTM1Q9HBL6 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
LRTM1Q9HBL6 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
LRTM1Q9HBL6 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
LRTM1Q9HBL6 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
LRTM1Q9HBL6 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC16.42■□□□□ 0.22
LRTM1Q9HBL6 BET1L-206ENST00000486280 665 ntTSL 3 BASIC16.42■□□□□ 0.22
LRTM1Q9HBL6 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC16.42■□□□□ 0.22
LRTM1Q9HBL6 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC16.42■□□□□ 0.22
LRTM1Q9HBL6 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
LRTM1Q9HBL6 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC16.42■□□□□ 0.22
LRTM1Q9HBL6 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
LRTM1Q9HBL6 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC16.42■□□□□ 0.22
LRTM1Q9HBL6 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
LRTM1Q9HBL6 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
LRTM1Q9HBL6 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
LRTM1Q9HBL6 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
LRTM1Q9HBL6 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC16.42■□□□□ 0.22
LRTM1Q9HBL6 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
LRTM1Q9HBL6 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC16.42■□□□□ 0.22
LRTM1Q9HBL6 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
LRTM1Q9HBL6 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
LRTM1Q9HBL6 AC097637.2-201ENST00000624096 1997 ntBASIC16.42■□□□□ 0.22
LRTM1Q9HBL6 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
LRTM1Q9HBL6 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
LRTM1Q9HBL6 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
LRTM1Q9HBL6 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC16.42■□□□□ 0.22
LRTM1Q9HBL6 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
LRTM1Q9HBL6 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC16.42■□□□□ 0.22
LRTM1Q9HBL6 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
LRTM1Q9HBL6 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
LRTM1Q9HBL6 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC16.41■□□□□ 0.22
LRTM1Q9HBL6 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
LRTM1Q9HBL6 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC16.41■□□□□ 0.22
LRTM1Q9HBL6 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
LRTM1Q9HBL6 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
LRTM1Q9HBL6 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
LRTM1Q9HBL6 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
LRTM1Q9HBL6 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
LRTM1Q9HBL6 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
LRTM1Q9HBL6 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC16.41■□□□□ 0.22
LRTM1Q9HBL6 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC16.41■□□□□ 0.22
LRTM1Q9HBL6 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
LRTM1Q9HBL6 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
LRTM1Q9HBL6 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
LRTM1Q9HBL6 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC16.41■□□□□ 0.22
LRTM1Q9HBL6 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC16.41■□□□□ 0.22
LRTM1Q9HBL6 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
LRTM1Q9HBL6 ABCD1P5-201ENST00000445663 754 ntBASIC16.41■□□□□ 0.22
LRTM1Q9HBL6 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC16.41■□□□□ 0.22
LRTM1Q9HBL6 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC16.41■□□□□ 0.22
LRTM1Q9HBL6 AC012615.1-201ENST00000565797 1299 ntBASIC16.41■□□□□ 0.22
LRTM1Q9HBL6 GZMM-202ENST00000592501 941 ntTSL 3 BASIC16.41■□□□□ 0.22
LRTM1Q9HBL6 AC099336.1-202ENST00000602961 463 ntBASIC16.41■□□□□ 0.22
LRTM1Q9HBL6 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
LRTM1Q9HBL6 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
LRTM1Q9HBL6 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
LRTM1Q9HBL6 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
LRTM1Q9HBL6 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
LRTM1Q9HBL6 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC16.41■□□□□ 0.22
LRTM1Q9HBL6 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
LRTM1Q9HBL6 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC16.41■□□□□ 0.22
LRTM1Q9HBL6 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC16.41■□□□□ 0.22
LRTM1Q9HBL6 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC16.4■□□□□ 0.22
LRTM1Q9HBL6 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
LRTM1Q9HBL6 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LRTM1Q9HBL6 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LRTM1Q9HBL6 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
LRTM1Q9HBL6 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LRTM1Q9HBL6 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC16.4■□□□□ 0.22
LRTM1Q9HBL6 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LRTM1Q9HBL6 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
LRTM1Q9HBL6 SIGLEC16-201ENST00000599858 1437 ntBASIC16.4■□□□□ 0.22
LRTM1Q9HBL6 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LRTM1Q9HBL6 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LRTM1Q9HBL6 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC16.4■□□□□ 0.22
LRTM1Q9HBL6 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
LRTM1Q9HBL6 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC16.4■□□□□ 0.22
LRTM1Q9HBL6 S100A2-206ENST00000497140 697 ntTSL 2 BASIC16.4■□□□□ 0.22
LRTM1Q9HBL6 COPE-211ENST00000600932 1144 ntTSL 5 BASIC16.4■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 126.5 ms