Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
RTFDC1Q9BY42 LINC00895-201ENST00000629028 1637 ntBASIC20.52■□□□□ 0.88
RTFDC1Q9BY42 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
RTFDC1Q9BY42 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC20.52■□□□□ 0.87
RTFDC1Q9BY42 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
RTFDC1Q9BY42 GRAMD4P3-201ENST00000621665 1669 ntBASIC20.51■□□□□ 0.87
RTFDC1Q9BY42 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC20.51■□□□□ 0.87
RTFDC1Q9BY42 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC20.51■□□□□ 0.87
RTFDC1Q9BY42 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RTFDC1Q9BY42 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RTFDC1Q9BY42 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
RTFDC1Q9BY42 OR8S1-201ENST00000310194 1080 ntBASIC20.51■□□□□ 0.87
RTFDC1Q9BY42 SLC25A1P3-201ENST00000395415 828 ntBASIC20.51■□□□□ 0.87
RTFDC1Q9BY42 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
RTFDC1Q9BY42 HLA-V-204ENST00000476601 1289 ntBASIC20.51■□□□□ 0.87
RTFDC1Q9BY42 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC20.51■□□□□ 0.87
RTFDC1Q9BY42 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC20.51■□□□□ 0.87
RTFDC1Q9BY42 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RTFDC1Q9BY42 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC20.51■□□□□ 0.87
RTFDC1Q9BY42 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC20.51■□□□□ 0.87
RTFDC1Q9BY42 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC20.51■□□□□ 0.87
RTFDC1Q9BY42 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
RTFDC1Q9BY42 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RTFDC1Q9BY42 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
RTFDC1Q9BY42 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC20.5■□□□□ 0.87
RTFDC1Q9BY42 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RTFDC1Q9BY42 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
RTFDC1Q9BY42 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
RTFDC1Q9BY42 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
RTFDC1Q9BY42 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC20.5■□□□□ 0.87
RTFDC1Q9BY42 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC20.5■□□□□ 0.87
RTFDC1Q9BY42 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RTFDC1Q9BY42 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
RTFDC1Q9BY42 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
RTFDC1Q9BY42 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC20.5■□□□□ 0.87
RTFDC1Q9BY42 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC20.5■□□□□ 0.87
RTFDC1Q9BY42 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC20.5■□□□□ 0.87
RTFDC1Q9BY42 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC20.5■□□□□ 0.87
RTFDC1Q9BY42 CD276-203ENST00000537340 2439 ntTSL 2 BASIC20.5■□□□□ 0.87
RTFDC1Q9BY42 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
RTFDC1Q9BY42 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
RTFDC1Q9BY42 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
RTFDC1Q9BY42 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RTFDC1Q9BY42 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC20.5■□□□□ 0.87
RTFDC1Q9BY42 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC20.5■□□□□ 0.87
RTFDC1Q9BY42 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
RTFDC1Q9BY42 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
RTFDC1Q9BY42 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
RTFDC1Q9BY42 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC20.5■□□□□ 0.87
RTFDC1Q9BY42 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RTFDC1Q9BY42 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
RTFDC1Q9BY42 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
RTFDC1Q9BY42 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
RTFDC1Q9BY42 FOS-208ENST00000555686 1496 ntTSL 2 BASIC20.5■□□□□ 0.87
RTFDC1Q9BY42 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC20.49■□□□□ 0.87
RTFDC1Q9BY42 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
RTFDC1Q9BY42 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
RTFDC1Q9BY42 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
RTFDC1Q9BY42 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC20.49■□□□□ 0.87
RTFDC1Q9BY42 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
RTFDC1Q9BY42 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
RTFDC1Q9BY42 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
RTFDC1Q9BY42 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
RTFDC1Q9BY42 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
RTFDC1Q9BY42 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
RTFDC1Q9BY42 AC009477.1-201ENST00000452936 217 ntBASIC20.49■□□□□ 0.87
RTFDC1Q9BY42 RN7SL692P-201ENST00000464677 288 ntBASIC20.49■□□□□ 0.87
RTFDC1Q9BY42 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
RTFDC1Q9BY42 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
RTFDC1Q9BY42 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC20.49■□□□□ 0.87
RTFDC1Q9BY42 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC20.49■□□□□ 0.87
RTFDC1Q9BY42 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC20.49■□□□□ 0.87
RTFDC1Q9BY42 MIR4492-201ENST00000581627 80 ntBASIC20.49■□□□□ 0.87
RTFDC1Q9BY42 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC20.49■□□□□ 0.87
RTFDC1Q9BY42 AC021097.1-201ENST00000607902 574 ntBASIC20.49■□□□□ 0.87
RTFDC1Q9BY42 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
RTFDC1Q9BY42 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
RTFDC1Q9BY42 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
RTFDC1Q9BY42 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
RTFDC1Q9BY42 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
RTFDC1Q9BY42 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
RTFDC1Q9BY42 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC20.48■□□□□ 0.87
RTFDC1Q9BY42 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC20.48■□□□□ 0.87
RTFDC1Q9BY42 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC20.48■□□□□ 0.87
RTFDC1Q9BY42 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC20.48■□□□□ 0.87
RTFDC1Q9BY42 FOXO1B-201ENST00000504678 1527 ntBASIC20.48■□□□□ 0.87
RTFDC1Q9BY42 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
RTFDC1Q9BY42 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
RTFDC1Q9BY42 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
RTFDC1Q9BY42 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC20.48■□□□□ 0.87
RTFDC1Q9BY42 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC20.48■□□□□ 0.87
RTFDC1Q9BY42 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
RTFDC1Q9BY42 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC20.48■□□□□ 0.87
RTFDC1Q9BY42 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
RTFDC1Q9BY42 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
RTFDC1Q9BY42 SATB1-217ENST00000493952 626 ntTSL 3 BASIC20.48■□□□□ 0.87
RTFDC1Q9BY42 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC20.48■□□□□ 0.87
RTFDC1Q9BY42 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC20.48■□□□□ 0.87
RTFDC1Q9BY42 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC20.48■□□□□ 0.87
RTFDC1Q9BY42 MPI-209ENST00000564003 1195 ntTSL 2 BASIC20.48■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms