Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC14.25□□□□□ -0.13
SSBP3Q9BWW4 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SSBP3Q9BWW4 KRT18P13-201ENST00000400056 1290 ntBASIC14.25□□□□□ -0.13
SSBP3Q9BWW4 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SSBP3Q9BWW4 BX842568.4-201ENST00000421222 227 ntBASIC14.25□□□□□ -0.13
SSBP3Q9BWW4 VN2R19P-201ENST00000442399 1052 ntBASIC14.25□□□□□ -0.13
SSBP3Q9BWW4 AC092865.5-201ENST00000545435 363 ntBASIC14.25□□□□□ -0.13
SSBP3Q9BWW4 RIN3-211ENST00000557762 517 ntTSL 3 BASIC14.25□□□□□ -0.13
SSBP3Q9BWW4 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
SSBP3Q9BWW4 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
SSBP3Q9BWW4 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC14.25□□□□□ -0.13
SSBP3Q9BWW4 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SSBP3Q9BWW4 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
SSBP3Q9BWW4 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SSBP3Q9BWW4 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
SSBP3Q9BWW4 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC14.25□□□□□ -0.13
SSBP3Q9BWW4 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SSBP3Q9BWW4 CEP83-AS1-201ENST00000623122 2482 ntBASIC14.25□□□□□ -0.13
SSBP3Q9BWW4 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC14.25□□□□□ -0.13
SSBP3Q9BWW4 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
SSBP3Q9BWW4 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
SSBP3Q9BWW4 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
SSBP3Q9BWW4 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
SSBP3Q9BWW4 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
SSBP3Q9BWW4 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SSBP3Q9BWW4 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC14.25□□□□□ -0.13
SSBP3Q9BWW4 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SSBP3Q9BWW4 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SSBP3Q9BWW4 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC14.24□□□□□ -0.13
SSBP3Q9BWW4 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SSBP3Q9BWW4 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SSBP3Q9BWW4 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
SSBP3Q9BWW4 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SSBP3Q9BWW4 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SSBP3Q9BWW4 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
SSBP3Q9BWW4 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
SSBP3Q9BWW4 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC14.24□□□□□ -0.13
SSBP3Q9BWW4 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
SSBP3Q9BWW4 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SSBP3Q9BWW4 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SSBP3Q9BWW4 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
SSBP3Q9BWW4 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
SSBP3Q9BWW4 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC14.24□□□□□ -0.13
SSBP3Q9BWW4 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
SSBP3Q9BWW4 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SSBP3Q9BWW4 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC14.24□□□□□ -0.13
SSBP3Q9BWW4 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC14.24□□□□□ -0.13
SSBP3Q9BWW4 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC14.24□□□□□ -0.13
SSBP3Q9BWW4 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC14.24□□□□□ -0.13
SSBP3Q9BWW4 NMU-202ENST00000505262 693 ntTSL 3 BASIC14.24□□□□□ -0.13
SSBP3Q9BWW4 PGAM5P1-201ENST00000518923 814 ntBASIC14.24□□□□□ -0.13
SSBP3Q9BWW4 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC14.24□□□□□ -0.13
SSBP3Q9BWW4 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC14.24□□□□□ -0.13
SSBP3Q9BWW4 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
SSBP3Q9BWW4 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC14.24□□□□□ -0.13
SSBP3Q9BWW4 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC14.24□□□□□ -0.13
SSBP3Q9BWW4 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC14.24□□□□□ -0.13
SSBP3Q9BWW4 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC14.24□□□□□ -0.13
SSBP3Q9BWW4 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SSBP3Q9BWW4 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC14.24□□□□□ -0.13
SSBP3Q9BWW4 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SSBP3Q9BWW4 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC14.24□□□□□ -0.13
SSBP3Q9BWW4 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SSBP3Q9BWW4 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SSBP3Q9BWW4 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SSBP3Q9BWW4 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC14.24□□□□□ -0.13
SSBP3Q9BWW4 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SSBP3Q9BWW4 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SSBP3Q9BWW4 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SSBP3Q9BWW4 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
SSBP3Q9BWW4 AC016396.2-201ENST00000562575 1417 ntBASIC14.24□□□□□ -0.13
SSBP3Q9BWW4 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SSBP3Q9BWW4 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
SSBP3Q9BWW4 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
SSBP3Q9BWW4 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC14.23□□□□□ -0.13
SSBP3Q9BWW4 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
SSBP3Q9BWW4 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SSBP3Q9BWW4 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SSBP3Q9BWW4 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SSBP3Q9BWW4 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
SSBP3Q9BWW4 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC14.23□□□□□ -0.13
SSBP3Q9BWW4 AL138688.1-201ENST00000624851 1594 ntBASIC14.23□□□□□ -0.13
SSBP3Q9BWW4 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SSBP3Q9BWW4 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC14.23□□□□□ -0.13
SSBP3Q9BWW4 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SSBP3Q9BWW4 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SSBP3Q9BWW4 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SSBP3Q9BWW4 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC14.23□□□□□ -0.13
SSBP3Q9BWW4 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC14.23□□□□□ -0.13
SSBP3Q9BWW4 COX10-202ENST00000429152 875 ntTSL 2 BASIC14.23□□□□□ -0.13
SSBP3Q9BWW4 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC14.23□□□□□ -0.13
SSBP3Q9BWW4 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC14.23□□□□□ -0.13
SSBP3Q9BWW4 CIPC-205ENST00000555437 566 ntTSL 3 BASIC14.23□□□□□ -0.13
SSBP3Q9BWW4 AC002347.1-201ENST00000569543 541 ntBASIC14.23□□□□□ -0.13
SSBP3Q9BWW4 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC14.23□□□□□ -0.13
SSBP3Q9BWW4 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC14.23□□□□□ -0.13
SSBP3Q9BWW4 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SSBP3Q9BWW4 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
SSBP3Q9BWW4 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
SSBP3Q9BWW4 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC14.23□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms