Protein–RNA interactions for Protein: Q9BT23

LIMD2, LIM domain-containing protein 2, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2Q9BT23 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC10.23□□□□□ -0.77
LIMD2Q9BT23 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
LIMD2Q9BT23 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
LIMD2Q9BT23 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC10.23□□□□□ -0.77
LIMD2Q9BT23 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
LIMD2Q9BT23 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC10.23□□□□□ -0.77
LIMD2Q9BT23 CFAP46-202ENST00000368586 8278 ntAPPRIS P2 TSL 5 BASIC10.23□□□□□ -0.77
LIMD2Q9BT23 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC10.23□□□□□ -0.77
LIMD2Q9BT23 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC10.23□□□□□ -0.77
LIMD2Q9BT23 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
LIMD2Q9BT23 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
LIMD2Q9BT23 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
LIMD2Q9BT23 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
LIMD2Q9BT23 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
LIMD2Q9BT23 AC009949.1-201ENST00000623048 1830 ntBASIC10.23□□□□□ -0.77
LIMD2Q9BT23 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC10.23□□□□□ -0.77
LIMD2Q9BT23 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
LIMD2Q9BT23 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC10.23□□□□□ -0.77
LIMD2Q9BT23 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
LIMD2Q9BT23 HYMAI-201ENST00000635591 3347 ntBASIC10.23□□□□□ -0.77
LIMD2Q9BT23 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
LIMD2Q9BT23 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
LIMD2Q9BT23 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC10.23□□□□□ -0.77
LIMD2Q9BT23 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
LIMD2Q9BT23 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
LIMD2Q9BT23 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
LIMD2Q9BT23 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
LIMD2Q9BT23 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC10.22□□□□□ -0.77
LIMD2Q9BT23 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC10.22□□□□□ -0.77
LIMD2Q9BT23 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
LIMD2Q9BT23 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC10.22□□□□□ -0.77
LIMD2Q9BT23 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC10.22□□□□□ -0.77
LIMD2Q9BT23 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC10.22□□□□□ -0.77
LIMD2Q9BT23 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
LIMD2Q9BT23 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
LIMD2Q9BT23 CROCCP2-202ENST00000412962 2773 ntBASIC10.22□□□□□ -0.77
LIMD2Q9BT23 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC10.22□□□□□ -0.77
LIMD2Q9BT23 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC10.22□□□□□ -0.77
LIMD2Q9BT23 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC10.22□□□□□ -0.77
LIMD2Q9BT23 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
LIMD2Q9BT23 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
LIMD2Q9BT23 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
LIMD2Q9BT23 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
LIMD2Q9BT23 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC10.22□□□□□ -0.77
LIMD2Q9BT23 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC10.22□□□□□ -0.77
LIMD2Q9BT23 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
LIMD2Q9BT23 BANP-201ENST00000286122 2368 ntTSL 5 BASIC10.22□□□□□ -0.77
LIMD2Q9BT23 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC10.22□□□□□ -0.77
LIMD2Q9BT23 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
LIMD2Q9BT23 GRSF1-201ENST00000254799 6666 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
LIMD2Q9BT23 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
LIMD2Q9BT23 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
LIMD2Q9BT23 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
LIMD2Q9BT23 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
LIMD2Q9BT23 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
LIMD2Q9BT23 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC10.22□□□□□ -0.77
LIMD2Q9BT23 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
LIMD2Q9BT23 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
LIMD2Q9BT23 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
LIMD2Q9BT23 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC10.22□□□□□ -0.77
LIMD2Q9BT23 SAPCD2P2-201ENST00000431719 1174 ntBASIC10.22□□□□□ -0.77
LIMD2Q9BT23 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC10.22□□□□□ -0.77
LIMD2Q9BT23 CNP-204ENST00000472031 1019 ntTSL 2 BASIC10.22□□□□□ -0.77
LIMD2Q9BT23 DUX4L26-201ENST00000489078 1255 ntBASIC10.22□□□□□ -0.77
LIMD2Q9BT23 IGHV3-52-201ENST00000519770 353 ntBASIC10.22□□□□□ -0.77
LIMD2Q9BT23 VENTXP5-201ENST00000523979 775 ntBASIC10.22□□□□□ -0.77
LIMD2Q9BT23 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
LIMD2Q9BT23 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC10.22□□□□□ -0.77
LIMD2Q9BT23 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC10.22□□□□□ -0.77
LIMD2Q9BT23 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC10.22□□□□□ -0.77
LIMD2Q9BT23 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC10.22□□□□□ -0.77
LIMD2Q9BT23 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
LIMD2Q9BT23 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
LIMD2Q9BT23 AC100803.2-201ENST00000562459 1963 ntBASIC10.22□□□□□ -0.77
LIMD2Q9BT23 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC10.22□□□□□ -0.77
LIMD2Q9BT23 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC10.22□□□□□ -0.77
LIMD2Q9BT23 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
LIMD2Q9BT23 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
LIMD2Q9BT23 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC10.22□□□□□ -0.77
LIMD2Q9BT23 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
LIMD2Q9BT23 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC10.22□□□□□ -0.77
LIMD2Q9BT23 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC10.22□□□□□ -0.77
LIMD2Q9BT23 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
LIMD2Q9BT23 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
LIMD2Q9BT23 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
LIMD2Q9BT23 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
LIMD2Q9BT23 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC10.22□□□□□ -0.77
LIMD2Q9BT23 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC10.22□□□□□ -0.77
LIMD2Q9BT23 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC10.22□□□□□ -0.77
LIMD2Q9BT23 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
LIMD2Q9BT23 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC10.22□□□□□ -0.77
LIMD2Q9BT23 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC10.22□□□□□ -0.77
LIMD2Q9BT23 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC10.22□□□□□ -0.77
LIMD2Q9BT23 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC10.22□□□□□ -0.77
LIMD2Q9BT23 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
LIMD2Q9BT23 AL023806.1-201ENST00000603994 1649 ntBASIC10.22□□□□□ -0.77
LIMD2Q9BT23 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
LIMD2Q9BT23 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
LIMD2Q9BT23 RERE-204ENST00000400908 5790 ntAPPRIS P2 TSL 1 (best) BASIC10.22□□□□□ -0.77
LIMD2Q9BT23 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms