Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
ABCA3Q99758 KRT8P12-202ENST00000472924 1397 ntBASIC22.3■■□□□ 1.16
ABCA3Q99758 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
ABCA3Q99758 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
ABCA3Q99758 RPF1-202ENST00000370656 724 ntTSL 2 BASIC22.29■■□□□ 1.16
ABCA3Q99758 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC22.29■■□□□ 1.16
ABCA3Q99758 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC22.29■■□□□ 1.16
ABCA3Q99758 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC22.29■■□□□ 1.16
ABCA3Q99758 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC22.29■■□□□ 1.16
ABCA3Q99758 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC22.29■■□□□ 1.16
ABCA3Q99758 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
ABCA3Q99758 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC22.29■■□□□ 1.16
ABCA3Q99758 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
ABCA3Q99758 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC22.29■■□□□ 1.16
ABCA3Q99758 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
ABCA3Q99758 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
ABCA3Q99758 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
ABCA3Q99758 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
ABCA3Q99758 AC090164.3-201ENST00000610780 2143 ntBASIC22.29■■□□□ 1.16
ABCA3Q99758 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC22.29■■□□□ 1.16
ABCA3Q99758 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
ABCA3Q99758 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC22.29■■□□□ 1.16
ABCA3Q99758 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
ABCA3Q99758 AC133963.1-201ENST00000504166 1679 ntBASIC22.29■■□□□ 1.16
ABCA3Q99758 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
ABCA3Q99758 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC22.29■■□□□ 1.16
ABCA3Q99758 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC22.29■■□□□ 1.16
ABCA3Q99758 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC22.28■■□□□ 1.16
ABCA3Q99758 NME9-203ENST00000383180 2133 ntTSL 2 BASIC22.28■■□□□ 1.16
ABCA3Q99758 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC22.28■■□□□ 1.16
ABCA3Q99758 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC22.28■■□□□ 1.16
ABCA3Q99758 WFDC1-204ENST00000613603 549 ntBASIC22.28■■□□□ 1.16
ABCA3Q99758 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC22.28■■□□□ 1.16
ABCA3Q99758 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
ABCA3Q99758 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
ABCA3Q99758 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
ABCA3Q99758 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
ABCA3Q99758 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC22.28■■□□□ 1.16
ABCA3Q99758 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC22.28■■□□□ 1.16
ABCA3Q99758 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC22.28■■□□□ 1.16
ABCA3Q99758 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
ABCA3Q99758 NOC2LP1-202ENST00000452600 2235 ntBASIC22.28■■□□□ 1.16
ABCA3Q99758 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC22.28■■□□□ 1.16
ABCA3Q99758 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC22.28■■□□□ 1.16
ABCA3Q99758 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC22.28■■□□□ 1.16
ABCA3Q99758 AC123567.1-201ENST00000548294 1261 ntBASIC22.28■■□□□ 1.16
ABCA3Q99758 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC22.28■■□□□ 1.16
ABCA3Q99758 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC22.28■■□□□ 1.16
ABCA3Q99758 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC22.28■■□□□ 1.16
ABCA3Q99758 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC22.28■■□□□ 1.16
ABCA3Q99758 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC22.27■■□□□ 1.16
ABCA3Q99758 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC22.27■■□□□ 1.16
ABCA3Q99758 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
ABCA3Q99758 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
ABCA3Q99758 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC22.27■■□□□ 1.16
ABCA3Q99758 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC22.27■■□□□ 1.16
ABCA3Q99758 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
ABCA3Q99758 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
ABCA3Q99758 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
ABCA3Q99758 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC22.27■■□□□ 1.16
ABCA3Q99758 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
ABCA3Q99758 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC22.27■■□□□ 1.16
ABCA3Q99758 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC22.27■■□□□ 1.16
ABCA3Q99758 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC22.27■■□□□ 1.16
ABCA3Q99758 MFF-223ENST00000524634 647 ntTSL 2 BASIC22.27■■□□□ 1.16
ABCA3Q99758 USB1-203ENST00000539737 1212 ntTSL 2 BASIC22.27■■□□□ 1.16
ABCA3Q99758 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC22.27■■□□□ 1.16
ABCA3Q99758 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC22.27■■□□□ 1.16
ABCA3Q99758 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
ABCA3Q99758 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
ABCA3Q99758 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
ABCA3Q99758 AC116353.5-201ENST00000638148 1699 ntBASIC22.27■■□□□ 1.16
ABCA3Q99758 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
ABCA3Q99758 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC22.27■■□□□ 1.16
ABCA3Q99758 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
ABCA3Q99758 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC22.27■■□□□ 1.16
ABCA3Q99758 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC22.27■■□□□ 1.15
ABCA3Q99758 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC22.27■■□□□ 1.15
ABCA3Q99758 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC22.26■■□□□ 1.15
ABCA3Q99758 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
ABCA3Q99758 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC22.26■■□□□ 1.15
ABCA3Q99758 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
ABCA3Q99758 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC22.26■■□□□ 1.15
ABCA3Q99758 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC22.26■■□□□ 1.15
ABCA3Q99758 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
ABCA3Q99758 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC22.26■■□□□ 1.15
ABCA3Q99758 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC22.26■■□□□ 1.15
ABCA3Q99758 AC092337.1-201ENST00000568699 1129 ntBASIC22.26■■□□□ 1.15
ABCA3Q99758 AC061975.2-201ENST00000581722 295 ntBASIC22.26■■□□□ 1.15
ABCA3Q99758 MIR6775-201ENST00000617557 69 ntBASIC22.26■■□□□ 1.15
ABCA3Q99758 AC004461.2-201ENST00000629517 803 ntBASIC22.26■■□□□ 1.15
ABCA3Q99758 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC22.26■■□□□ 1.15
ABCA3Q99758 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
ABCA3Q99758 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
ABCA3Q99758 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC22.26■■□□□ 1.15
ABCA3Q99758 AL021920.2-201ENST00000624828 1351 ntBASIC22.26■■□□□ 1.15
ABCA3Q99758 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC22.26■■□□□ 1.15
ABCA3Q99758 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC22.26■■□□□ 1.15
ABCA3Q99758 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC22.26■■□□□ 1.15
ABCA3Q99758 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC22.26■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms