Protein–RNA interactions for Protein: Q99742

NPAS1, Neuronal PAS domain-containing protein 1, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS1Q99742 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC15.57■□□□□ 0.08
NPAS1Q99742 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
NPAS1Q99742 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
NPAS1Q99742 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
NPAS1Q99742 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
NPAS1Q99742 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC15.56■□□□□ 0.08
NPAS1Q99742 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC15.56■□□□□ 0.08
NPAS1Q99742 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
NPAS1Q99742 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
NPAS1Q99742 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC15.56■□□□□ 0.08
NPAS1Q99742 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC15.56■□□□□ 0.08
NPAS1Q99742 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
NPAS1Q99742 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
NPAS1Q99742 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
NPAS1Q99742 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
NPAS1Q99742 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
NPAS1Q99742 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
NPAS1Q99742 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
NPAS1Q99742 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC15.56■□□□□ 0.08
NPAS1Q99742 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC15.56■□□□□ 0.08
NPAS1Q99742 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC15.56■□□□□ 0.08
NPAS1Q99742 AC098831.1-202ENST00000438821 336 ntBASIC15.56■□□□□ 0.08
NPAS1Q99742 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC15.56■□□□□ 0.08
NPAS1Q99742 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
NPAS1Q99742 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC15.56■□□□□ 0.08
NPAS1Q99742 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC15.56■□□□□ 0.08
NPAS1Q99742 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC15.56■□□□□ 0.08
NPAS1Q99742 AC006557.2-201ENST00000592985 1240 ntBASIC15.56■□□□□ 0.08
NPAS1Q99742 AL356488.2-201ENST00000602755 427 ntBASIC15.56■□□□□ 0.08
NPAS1Q99742 PRKN-208ENST00000610470 531 ntTSL 2 BASIC15.56■□□□□ 0.08
NPAS1Q99742 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC15.56■□□□□ 0.08
NPAS1Q99742 PRKN-209ENST00000612485 225 ntTSL 5 BASIC15.56■□□□□ 0.08
NPAS1Q99742 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC15.56■□□□□ 0.08
NPAS1Q99742 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
NPAS1Q99742 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
NPAS1Q99742 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
NPAS1Q99742 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
NPAS1Q99742 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC15.56■□□□□ 0.08
NPAS1Q99742 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
NPAS1Q99742 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
NPAS1Q99742 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
NPAS1Q99742 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC15.56■□□□□ 0.08
NPAS1Q99742 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
NPAS1Q99742 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
NPAS1Q99742 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
NPAS1Q99742 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
NPAS1Q99742 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC15.55■□□□□ 0.08
NPAS1Q99742 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
NPAS1Q99742 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
NPAS1Q99742 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
NPAS1Q99742 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
NPAS1Q99742 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
NPAS1Q99742 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC15.55■□□□□ 0.08
NPAS1Q99742 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
NPAS1Q99742 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
NPAS1Q99742 GPR89P-201ENST00000407924 1495 ntBASIC15.55■□□□□ 0.08
NPAS1Q99742 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
NPAS1Q99742 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC15.55■□□□□ 0.08
NPAS1Q99742 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
NPAS1Q99742 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC15.55■□□□□ 0.08
NPAS1Q99742 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC15.55■□□□□ 0.08
NPAS1Q99742 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC15.55■□□□□ 0.08
NPAS1Q99742 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC15.55■□□□□ 0.08
NPAS1Q99742 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC15.55■□□□□ 0.08
NPAS1Q99742 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC15.55■□□□□ 0.08
NPAS1Q99742 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC15.55■□□□□ 0.08
NPAS1Q99742 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC15.55■□□□□ 0.08
NPAS1Q99742 RPS29-206ENST00000557111 488 ntTSL 2 BASIC15.55■□□□□ 0.08
NPAS1Q99742 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
NPAS1Q99742 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC15.55■□□□□ 0.08
NPAS1Q99742 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC15.55■□□□□ 0.08
NPAS1Q99742 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
NPAS1Q99742 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
NPAS1Q99742 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
NPAS1Q99742 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
NPAS1Q99742 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
NPAS1Q99742 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
NPAS1Q99742 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
NPAS1Q99742 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC15.55■□□□□ 0.08
NPAS1Q99742 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
NPAS1Q99742 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC15.54■□□□□ 0.08
NPAS1Q99742 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
NPAS1Q99742 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
NPAS1Q99742 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
NPAS1Q99742 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
NPAS1Q99742 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
NPAS1Q99742 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
NPAS1Q99742 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
NPAS1Q99742 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
NPAS1Q99742 STX3-203ENST00000529177 1571 ntTSL 2 BASIC15.54■□□□□ 0.08
NPAS1Q99742 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
NPAS1Q99742 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
NPAS1Q99742 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
NPAS1Q99742 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
NPAS1Q99742 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
NPAS1Q99742 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
NPAS1Q99742 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
NPAS1Q99742 INIP-202ENST00000374236 874 ntTSL 2 BASIC15.54■□□□□ 0.08
NPAS1Q99742 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC15.54■□□□□ 0.08
NPAS1Q99742 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC15.54■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms