Protein–RNA interactions for Protein: Q99603

TRGV9, T-cell receptor gamma variable 9 (Fragment), humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV9Q99603 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRGV9Q99603 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC13.32□□□□□ -0.28
TRGV9Q99603 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRGV9Q99603 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC13.32□□□□□ -0.28
TRGV9Q99603 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRGV9Q99603 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
TRGV9Q99603 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRGV9Q99603 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRGV9Q99603 AL021920.2-201ENST00000624828 1351 ntBASIC13.32□□□□□ -0.28
TRGV9Q99603 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRGV9Q99603 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
TRGV9Q99603 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
TRGV9Q99603 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
TRGV9Q99603 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
TRGV9Q99603 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRGV9Q99603 MED25-212ENST00000618715 1467 ntTSL 5 BASIC13.31□□□□□ -0.28
TRGV9Q99603 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRGV9Q99603 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC13.31□□□□□ -0.28
TRGV9Q99603 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
TRGV9Q99603 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRGV9Q99603 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
TRGV9Q99603 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRGV9Q99603 AL020989.1-201ENST00000422979 469 ntBASIC13.31□□□□□ -0.28
TRGV9Q99603 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC13.31□□□□□ -0.28
TRGV9Q99603 SRP19-202ENST00000445150 833 ntTSL 2 BASIC13.31□□□□□ -0.28
TRGV9Q99603 AC091607.1-201ENST00000490318 1060 ntBASIC13.31□□□□□ -0.28
TRGV9Q99603 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC13.31□□□□□ -0.28
TRGV9Q99603 COX5A-202ENST00000562233 441 ntTSL 3 BASIC13.31□□□□□ -0.28
TRGV9Q99603 COX5A-204ENST00000567270 579 ntTSL 3 BASIC13.31□□□□□ -0.28
TRGV9Q99603 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
TRGV9Q99603 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
TRGV9Q99603 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC13.31□□□□□ -0.28
TRGV9Q99603 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC13.31□□□□□ -0.28
TRGV9Q99603 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRGV9Q99603 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRGV9Q99603 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC13.31□□□□□ -0.28
TRGV9Q99603 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRGV9Q99603 PMPCAP1-201ENST00000508114 1576 ntBASIC13.31□□□□□ -0.28
TRGV9Q99603 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
TRGV9Q99603 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC13.31□□□□□ -0.28
TRGV9Q99603 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
TRGV9Q99603 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
TRGV9Q99603 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRGV9Q99603 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRGV9Q99603 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRGV9Q99603 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRGV9Q99603 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC13.31□□□□□ -0.28
TRGV9Q99603 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC13.31□□□□□ -0.28
TRGV9Q99603 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRGV9Q99603 AL139384.1-201ENST00000612143 3047 ntBASIC13.31□□□□□ -0.28
TRGV9Q99603 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRGV9Q99603 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC13.31□□□□□ -0.28
TRGV9Q99603 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
TRGV9Q99603 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC13.31□□□□□ -0.28
TRGV9Q99603 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
TRGV9Q99603 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
TRGV9Q99603 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRGV9Q99603 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
TRGV9Q99603 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRGV9Q99603 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
TRGV9Q99603 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRGV9Q99603 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRGV9Q99603 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
TRGV9Q99603 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
TRGV9Q99603 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRGV9Q99603 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
TRGV9Q99603 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRGV9Q99603 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRGV9Q99603 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC13.3□□□□□ -0.28
TRGV9Q99603 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRGV9Q99603 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRGV9Q99603 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
TRGV9Q99603 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC13.3□□□□□ -0.28
TRGV9Q99603 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC13.3□□□□□ -0.28
TRGV9Q99603 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC13.3□□□□□ -0.28
TRGV9Q99603 HLA-J-202ENST00000469281 1241 ntBASIC13.3□□□□□ -0.28
TRGV9Q99603 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC13.3□□□□□ -0.28
TRGV9Q99603 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC13.3□□□□□ -0.28
TRGV9Q99603 Z69720.1-201ENST00000601483 472 ntBASIC13.3□□□□□ -0.28
TRGV9Q99603 AL121956.5-201ENST00000625261 221 ntBASIC13.3□□□□□ -0.28
TRGV9Q99603 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC13.3□□□□□ -0.28
TRGV9Q99603 INTS4P1-201ENST00000438455 1935 ntBASIC13.3□□□□□ -0.28
TRGV9Q99603 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRGV9Q99603 BANP-204ENST00000393208 2283 ntTSL 2 BASIC13.3□□□□□ -0.28
TRGV9Q99603 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRGV9Q99603 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRGV9Q99603 AL513523.2-202ENST00000427283 2040 ntBASIC13.3□□□□□ -0.28
TRGV9Q99603 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC13.3□□□□□ -0.28
TRGV9Q99603 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
TRGV9Q99603 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRGV9Q99603 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRGV9Q99603 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC13.3□□□□□ -0.28
TRGV9Q99603 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRGV9Q99603 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC13.29□□□□□ -0.28
TRGV9Q99603 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
TRGV9Q99603 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRGV9Q99603 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC13.29□□□□□ -0.28
TRGV9Q99603 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRGV9Q99603 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRGV9Q99603 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms