Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CSMD1Q96PZ7 VCPKMT-201ENST00000395859 795 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CSMD1Q96PZ7 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC14.37□□□□□ -0.11
CSMD1Q96PZ7 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC14.37□□□□□ -0.11
CSMD1Q96PZ7 AC008738.7-201ENST00000609744 511 ntBASIC14.37□□□□□ -0.11
CSMD1Q96PZ7 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CSMD1Q96PZ7 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CSMD1Q96PZ7 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC14.36□□□□□ -0.11
CSMD1Q96PZ7 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
CSMD1Q96PZ7 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
CSMD1Q96PZ7 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CSMD1Q96PZ7 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC14.36□□□□□ -0.11
CSMD1Q96PZ7 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CSMD1Q96PZ7 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CSMD1Q96PZ7 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CSMD1Q96PZ7 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CSMD1Q96PZ7 Z84485.1-202ENST00000499560 1230 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CSMD1Q96PZ7 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC14.36□□□□□ -0.11
CSMD1Q96PZ7 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC14.36□□□□□ -0.11
CSMD1Q96PZ7 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CSMD1Q96PZ7 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC14.36□□□□□ -0.11
CSMD1Q96PZ7 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CSMD1Q96PZ7 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CSMD1Q96PZ7 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC14.36□□□□□ -0.11
CSMD1Q96PZ7 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC14.36□□□□□ -0.11
CSMD1Q96PZ7 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC14.36□□□□□ -0.11
CSMD1Q96PZ7 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC14.36□□□□□ -0.11
CSMD1Q96PZ7 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CSMD1Q96PZ7 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CSMD1Q96PZ7 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CSMD1Q96PZ7 COMP-202ENST00000425807 2292 ntTSL 2 BASIC14.36□□□□□ -0.11
CSMD1Q96PZ7 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CSMD1Q96PZ7 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC14.35□□□□□ -0.11
CSMD1Q96PZ7 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC14.35□□□□□ -0.11
CSMD1Q96PZ7 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CSMD1Q96PZ7 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC14.35□□□□□ -0.11
CSMD1Q96PZ7 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC14.35□□□□□ -0.11
CSMD1Q96PZ7 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC14.35□□□□□ -0.11
CSMD1Q96PZ7 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC14.35□□□□□ -0.11
CSMD1Q96PZ7 CHCHD2P3-201ENST00000603038 451 ntBASIC14.35□□□□□ -0.11
CSMD1Q96PZ7 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC14.35□□□□□ -0.11
CSMD1Q96PZ7 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC14.35□□□□□ -0.11
CSMD1Q96PZ7 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
CSMD1Q96PZ7 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
CSMD1Q96PZ7 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CSMD1Q96PZ7 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CSMD1Q96PZ7 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CSMD1Q96PZ7 HNRNPA3P1-201ENST00000401429 1139 ntBASIC14.35□□□□□ -0.11
CSMD1Q96PZ7 AL513480.1-201ENST00000451731 511 ntBASIC14.35□□□□□ -0.11
CSMD1Q96PZ7 HNRNPA3P5-201ENST00000455201 833 ntBASIC14.35□□□□□ -0.11
CSMD1Q96PZ7 AC007333.1-201ENST00000568286 630 ntTSL 3 BASIC14.35□□□□□ -0.11
CSMD1Q96PZ7 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC14.35□□□□□ -0.11
CSMD1Q96PZ7 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
CSMD1Q96PZ7 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CSMD1Q96PZ7 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
CSMD1Q96PZ7 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
CSMD1Q96PZ7 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC14.35□□□□□ -0.11
CSMD1Q96PZ7 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC14.35□□□□□ -0.11
CSMD1Q96PZ7 EML3-212ENST00000494176 2901 ntTSL 2 BASIC14.35□□□□□ -0.11
CSMD1Q96PZ7 EML3-216ENST00000529309 2909 ntTSL 2 BASIC14.35□□□□□ -0.11
CSMD1Q96PZ7 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
CSMD1Q96PZ7 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CSMD1Q96PZ7 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CSMD1Q96PZ7 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
CSMD1Q96PZ7 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
CSMD1Q96PZ7 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CSMD1Q96PZ7 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CSMD1Q96PZ7 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC14.35□□□□□ -0.11
CSMD1Q96PZ7 HLA-V-204ENST00000476601 1289 ntBASIC14.35□□□□□ -0.11
CSMD1Q96PZ7 IGHV3-62-201ENST00000520057 340 ntBASIC14.35□□□□□ -0.11
CSMD1Q96PZ7 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC14.35□□□□□ -0.11
CSMD1Q96PZ7 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CSMD1Q96PZ7 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CSMD1Q96PZ7 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CSMD1Q96PZ7 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
CSMD1Q96PZ7 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
CSMD1Q96PZ7 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
CSMD1Q96PZ7 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC14.35□□□□□ -0.11
CSMD1Q96PZ7 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CSMD1Q96PZ7 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC14.34□□□□□ -0.11
CSMD1Q96PZ7 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
CSMD1Q96PZ7 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC14.34□□□□□ -0.11
CSMD1Q96PZ7 AP005482.1-201ENST00000563722 1273 ntBASIC14.34□□□□□ -0.11
CSMD1Q96PZ7 COG4-212ENST00000564653 590 ntTSL 5 BASIC14.34□□□□□ -0.11
CSMD1Q96PZ7 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC14.34□□□□□ -0.11
CSMD1Q96PZ7 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CSMD1Q96PZ7 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CSMD1Q96PZ7 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CSMD1Q96PZ7 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC14.34□□□□□ -0.11
CSMD1Q96PZ7 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC14.34□□□□□ -0.11
CSMD1Q96PZ7 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CSMD1Q96PZ7 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CSMD1Q96PZ7 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CSMD1Q96PZ7 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC14.34□□□□□ -0.11
CSMD1Q96PZ7 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
CSMD1Q96PZ7 BTBD7P1-201ENST00000447253 1453 ntBASIC14.34□□□□□ -0.11
CSMD1Q96PZ7 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CSMD1Q96PZ7 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CSMD1Q96PZ7 MIR663B-201ENST00000408361 115 ntBASIC14.34□□□□□ -0.11
CSMD1Q96PZ7 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC14.34□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 53.2 ms