Protein–RNA interactions for Protein: Q96PS6

GAFA1, Putative uncharacterized protein GAFA-1, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAFA1Q96PS6 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
GAFA1Q96PS6 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
GAFA1Q96PS6 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
GAFA1Q96PS6 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
GAFA1Q96PS6 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
GAFA1Q96PS6 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC14.17□□□□□ -0.14
GAFA1Q96PS6 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
GAFA1Q96PS6 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
GAFA1Q96PS6 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC14.17□□□□□ -0.14
GAFA1Q96PS6 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
GAFA1Q96PS6 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC14.17□□□□□ -0.14
GAFA1Q96PS6 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
GAFA1Q96PS6 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
GAFA1Q96PS6 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC14.16□□□□□ -0.14
GAFA1Q96PS6 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC14.16□□□□□ -0.14
GAFA1Q96PS6 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
GAFA1Q96PS6 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC14.16□□□□□ -0.14
GAFA1Q96PS6 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
GAFA1Q96PS6 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
GAFA1Q96PS6 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC14.16□□□□□ -0.14
GAFA1Q96PS6 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
GAFA1Q96PS6 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
GAFA1Q96PS6 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
GAFA1Q96PS6 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
GAFA1Q96PS6 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
GAFA1Q96PS6 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
GAFA1Q96PS6 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC14.16□□□□□ -0.14
GAFA1Q96PS6 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC14.16□□□□□ -0.14
GAFA1Q96PS6 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC14.16□□□□□ -0.14
GAFA1Q96PS6 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
GAFA1Q96PS6 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
GAFA1Q96PS6 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC14.16□□□□□ -0.14
GAFA1Q96PS6 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
GAFA1Q96PS6 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
GAFA1Q96PS6 Z83851.2-201ENST00000609564 659 ntBASIC14.16□□□□□ -0.14
GAFA1Q96PS6 AC120114.3-201ENST00000611923 658 ntBASIC14.16□□□□□ -0.14
GAFA1Q96PS6 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC14.16□□□□□ -0.14
GAFA1Q96PS6 REXO1L3P-201ENST00000622202 1288 ntBASIC14.16□□□□□ -0.14
GAFA1Q96PS6 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC14.16□□□□□ -0.14
GAFA1Q96PS6 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
GAFA1Q96PS6 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
GAFA1Q96PS6 AC105020.1-201ENST00000435356 2205 ntBASIC14.16□□□□□ -0.14
GAFA1Q96PS6 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
GAFA1Q96PS6 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
GAFA1Q96PS6 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
GAFA1Q96PS6 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
GAFA1Q96PS6 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
GAFA1Q96PS6 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC14.16□□□□□ -0.14
GAFA1Q96PS6 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC14.16□□□□□ -0.14
GAFA1Q96PS6 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
GAFA1Q96PS6 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC14.16□□□□□ -0.14
GAFA1Q96PS6 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
GAFA1Q96PS6 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
GAFA1Q96PS6 AC104109.2-201ENST00000602919 1418 ntBASIC14.15□□□□□ -0.14
GAFA1Q96PS6 KRT8P49-201ENST00000604166 1432 ntBASIC14.15□□□□□ -0.14
GAFA1Q96PS6 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC14.15□□□□□ -0.14
GAFA1Q96PS6 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
GAFA1Q96PS6 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
GAFA1Q96PS6 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC14.15□□□□□ -0.14
GAFA1Q96PS6 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC14.15□□□□□ -0.14
GAFA1Q96PS6 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
GAFA1Q96PS6 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
GAFA1Q96PS6 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC14.15□□□□□ -0.14
GAFA1Q96PS6 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
GAFA1Q96PS6 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
GAFA1Q96PS6 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
GAFA1Q96PS6 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
GAFA1Q96PS6 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
GAFA1Q96PS6 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
GAFA1Q96PS6 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
GAFA1Q96PS6 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC14.15□□□□□ -0.14
GAFA1Q96PS6 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
GAFA1Q96PS6 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC14.15□□□□□ -0.14
GAFA1Q96PS6 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
GAFA1Q96PS6 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
GAFA1Q96PS6 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
GAFA1Q96PS6 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC14.15□□□□□ -0.14
GAFA1Q96PS6 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC14.15□□□□□ -0.14
GAFA1Q96PS6 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC14.15□□□□□ -0.14
GAFA1Q96PS6 AC107918.2-201ENST00000530817 355 ntBASIC14.15□□□□□ -0.14
GAFA1Q96PS6 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC14.15□□□□□ -0.14
GAFA1Q96PS6 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC14.15□□□□□ -0.14
GAFA1Q96PS6 OR7E47P-204ENST00000575924 449 ntBASIC14.15□□□□□ -0.14
GAFA1Q96PS6 CYB561-216ENST00000582297 897 ntTSL 3 BASIC14.15□□□□□ -0.14
GAFA1Q96PS6 AC010654.1-201ENST00000615722 808 ntBASIC14.15□□□□□ -0.14
GAFA1Q96PS6 BX640515.1-201ENST00000617215 977 ntBASIC14.15□□□□□ -0.14
GAFA1Q96PS6 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC14.15□□□□□ -0.14
GAFA1Q96PS6 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
GAFA1Q96PS6 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
GAFA1Q96PS6 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC14.15□□□□□ -0.14
GAFA1Q96PS6 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
GAFA1Q96PS6 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
GAFA1Q96PS6 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC14.15□□□□□ -0.14
GAFA1Q96PS6 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
GAFA1Q96PS6 PCDHB17P-201ENST00000539533 2393 ntBASIC14.15□□□□□ -0.14
GAFA1Q96PS6 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC14.15□□□□□ -0.14
GAFA1Q96PS6 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC14.15□□□□□ -0.14
GAFA1Q96PS6 AD000864.1-201ENST00000624076 2295 ntBASIC14.15□□□□□ -0.14
GAFA1Q96PS6 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC14.15□□□□□ -0.15
GAFA1Q96PS6 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms