Protein–RNA interactions for Protein: Q96JM3

CHAMP1, Chromosome alignment-maintaining phosphoprotein 1, humanhuman

Predictions only

Length 812 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHAMP1Q96JM3 FAM220CP-201ENST00000395253 831 ntBASIC19.79■□□□□ 0.76
CHAMP1Q96JM3 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC19.79■□□□□ 0.76
CHAMP1Q96JM3 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC19.79■□□□□ 0.76
CHAMP1Q96JM3 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC19.79■□□□□ 0.76
CHAMP1Q96JM3 STK19B-204ENST00000512515 211 ntBASIC19.79■□□□□ 0.76
CHAMP1Q96JM3 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC19.79■□□□□ 0.76
CHAMP1Q96JM3 AC011498.5-201ENST00000592027 486 ntBASIC19.79■□□□□ 0.76
CHAMP1Q96JM3 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC19.79■□□□□ 0.76
CHAMP1Q96JM3 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC19.79■□□□□ 0.76
CHAMP1Q96JM3 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC19.79■□□□□ 0.76
CHAMP1Q96JM3 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CHAMP1Q96JM3 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
CHAMP1Q96JM3 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
CHAMP1Q96JM3 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC19.79■□□□□ 0.76
CHAMP1Q96JM3 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CHAMP1Q96JM3 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CHAMP1Q96JM3 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CHAMP1Q96JM3 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
CHAMP1Q96JM3 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CHAMP1Q96JM3 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC19.79■□□□□ 0.76
CHAMP1Q96JM3 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CHAMP1Q96JM3 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC19.79■□□□□ 0.76
CHAMP1Q96JM3 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
CHAMP1Q96JM3 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CHAMP1Q96JM3 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
CHAMP1Q96JM3 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC19.78■□□□□ 0.76
CHAMP1Q96JM3 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CHAMP1Q96JM3 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
CHAMP1Q96JM3 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
CHAMP1Q96JM3 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC19.78■□□□□ 0.76
CHAMP1Q96JM3 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CHAMP1Q96JM3 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CHAMP1Q96JM3 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
CHAMP1Q96JM3 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC19.78■□□□□ 0.76
CHAMP1Q96JM3 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CHAMP1Q96JM3 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CHAMP1Q96JM3 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CHAMP1Q96JM3 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CHAMP1Q96JM3 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
CHAMP1Q96JM3 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC19.78■□□□□ 0.76
CHAMP1Q96JM3 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CHAMP1Q96JM3 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC19.78■□□□□ 0.76
CHAMP1Q96JM3 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC19.78■□□□□ 0.76
CHAMP1Q96JM3 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC19.78■□□□□ 0.76
CHAMP1Q96JM3 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC19.78■□□□□ 0.76
CHAMP1Q96JM3 IGHV3-41-201ENST00000613121 348 ntBASIC19.78■□□□□ 0.76
CHAMP1Q96JM3 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC19.78■□□□□ 0.76
CHAMP1Q96JM3 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
CHAMP1Q96JM3 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC19.78■□□□□ 0.76
CHAMP1Q96JM3 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CHAMP1Q96JM3 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
CHAMP1Q96JM3 GPR89P-201ENST00000407924 1495 ntBASIC19.78■□□□□ 0.76
CHAMP1Q96JM3 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CHAMP1Q96JM3 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CHAMP1Q96JM3 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
CHAMP1Q96JM3 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CHAMP1Q96JM3 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC19.78■□□□□ 0.76
CHAMP1Q96JM3 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CHAMP1Q96JM3 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CHAMP1Q96JM3 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC19.78■□□□□ 0.76
CHAMP1Q96JM3 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
CHAMP1Q96JM3 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC19.78■□□□□ 0.76
CHAMP1Q96JM3 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
CHAMP1Q96JM3 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
CHAMP1Q96JM3 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC19.77■□□□□ 0.76
CHAMP1Q96JM3 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC19.77■□□□□ 0.76
CHAMP1Q96JM3 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
CHAMP1Q96JM3 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CHAMP1Q96JM3 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC19.77■□□□□ 0.76
CHAMP1Q96JM3 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC19.77■□□□□ 0.76
CHAMP1Q96JM3 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
CHAMP1Q96JM3 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CHAMP1Q96JM3 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
CHAMP1Q96JM3 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CHAMP1Q96JM3 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
CHAMP1Q96JM3 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CHAMP1Q96JM3 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
CHAMP1Q96JM3 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC19.77■□□□□ 0.76
CHAMP1Q96JM3 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC19.77■□□□□ 0.76
CHAMP1Q96JM3 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC19.77■□□□□ 0.76
CHAMP1Q96JM3 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
CHAMP1Q96JM3 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC19.77■□□□□ 0.76
CHAMP1Q96JM3 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC19.77■□□□□ 0.76
CHAMP1Q96JM3 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC19.77■□□□□ 0.76
CHAMP1Q96JM3 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC19.77■□□□□ 0.76
CHAMP1Q96JM3 AC022616.7-201ENST00000525383 220 ntBASIC19.77■□□□□ 0.76
CHAMP1Q96JM3 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
CHAMP1Q96JM3 AC111152.3-201ENST00000569699 673 ntBASIC19.77■□□□□ 0.76
CHAMP1Q96JM3 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
CHAMP1Q96JM3 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CHAMP1Q96JM3 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC19.77■□□□□ 0.76
CHAMP1Q96JM3 AC091076.1-201ENST00000610741 619 ntBASIC19.77■□□□□ 0.76
CHAMP1Q96JM3 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CHAMP1Q96JM3 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CHAMP1Q96JM3 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CHAMP1Q96JM3 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC19.77■□□□□ 0.76
CHAMP1Q96JM3 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
CHAMP1Q96JM3 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CHAMP1Q96JM3 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CHAMP1Q96JM3 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms