Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC17.35■□□□□ 0.37
SHROOM3Q8TF72 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SHROOM3Q8TF72 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SHROOM3Q8TF72 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SHROOM3Q8TF72 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC17.35■□□□□ 0.37
SHROOM3Q8TF72 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC17.35■□□□□ 0.37
SHROOM3Q8TF72 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SHROOM3Q8TF72 AL645728.1-201ENST00000366221 2101 ntBASIC17.35■□□□□ 0.37
SHROOM3Q8TF72 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
SHROOM3Q8TF72 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SHROOM3Q8TF72 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SHROOM3Q8TF72 HARS-204ENST00000438307 1789 ntTSL 2 BASIC17.34■□□□□ 0.37
SHROOM3Q8TF72 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
SHROOM3Q8TF72 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
SHROOM3Q8TF72 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
SHROOM3Q8TF72 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
SHROOM3Q8TF72 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
SHROOM3Q8TF72 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
SHROOM3Q8TF72 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SHROOM3Q8TF72 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
SHROOM3Q8TF72 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC17.34■□□□□ 0.37
SHROOM3Q8TF72 REXO1L3P-201ENST00000622202 1288 ntBASIC17.34■□□□□ 0.37
SHROOM3Q8TF72 AC131009.4-201ENST00000624048 1740 ntBASIC17.34■□□□□ 0.37
SHROOM3Q8TF72 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
SHROOM3Q8TF72 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC17.34■□□□□ 0.37
SHROOM3Q8TF72 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SHROOM3Q8TF72 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
SHROOM3Q8TF72 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC17.34■□□□□ 0.37
SHROOM3Q8TF72 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC17.34■□□□□ 0.37
SHROOM3Q8TF72 AC129492.6-201ENST00000611383 1305 ntBASIC17.34■□□□□ 0.37
SHROOM3Q8TF72 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SHROOM3Q8TF72 AC084018.2-201ENST00000613093 2607 ntBASIC17.34■□□□□ 0.37
SHROOM3Q8TF72 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC17.34■□□□□ 0.37
SHROOM3Q8TF72 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC17.34■□□□□ 0.37
SHROOM3Q8TF72 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC17.34■□□□□ 0.37
SHROOM3Q8TF72 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SHROOM3Q8TF72 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC17.33■□□□□ 0.37
SHROOM3Q8TF72 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC17.33■□□□□ 0.37
SHROOM3Q8TF72 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC17.33■□□□□ 0.37
SHROOM3Q8TF72 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SHROOM3Q8TF72 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
SHROOM3Q8TF72 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC17.33■□□□□ 0.37
SHROOM3Q8TF72 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SHROOM3Q8TF72 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC17.33■□□□□ 0.37
SHROOM3Q8TF72 SLC25A6P2-201ENST00000497974 877 ntBASIC17.33■□□□□ 0.37
SHROOM3Q8TF72 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
SHROOM3Q8TF72 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
SHROOM3Q8TF72 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC17.33■□□□□ 0.37
SHROOM3Q8TF72 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC17.33■□□□□ 0.37
SHROOM3Q8TF72 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SHROOM3Q8TF72 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
SHROOM3Q8TF72 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC17.33■□□□□ 0.37
SHROOM3Q8TF72 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SHROOM3Q8TF72 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
SHROOM3Q8TF72 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC17.33■□□□□ 0.36
SHROOM3Q8TF72 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SHROOM3Q8TF72 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
SHROOM3Q8TF72 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SHROOM3Q8TF72 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC17.33■□□□□ 0.36
SHROOM3Q8TF72 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
SHROOM3Q8TF72 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
SHROOM3Q8TF72 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
SHROOM3Q8TF72 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC17.33■□□□□ 0.36
SHROOM3Q8TF72 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC17.33■□□□□ 0.36
SHROOM3Q8TF72 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
SHROOM3Q8TF72 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
SHROOM3Q8TF72 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SHROOM3Q8TF72 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC17.33■□□□□ 0.36
SHROOM3Q8TF72 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
SHROOM3Q8TF72 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC17.33■□□□□ 0.36
SHROOM3Q8TF72 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC17.33■□□□□ 0.36
SHROOM3Q8TF72 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SHROOM3Q8TF72 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
SHROOM3Q8TF72 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC17.33■□□□□ 0.36
SHROOM3Q8TF72 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SHROOM3Q8TF72 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC17.33■□□□□ 0.36
SHROOM3Q8TF72 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC17.32■□□□□ 0.36
SHROOM3Q8TF72 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SHROOM3Q8TF72 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC17.32■□□□□ 0.36
SHROOM3Q8TF72 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SHROOM3Q8TF72 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC17.32■□□□□ 0.36
SHROOM3Q8TF72 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SHROOM3Q8TF72 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC17.32■□□□□ 0.36
SHROOM3Q8TF72 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
SHROOM3Q8TF72 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC17.32■□□□□ 0.36
SHROOM3Q8TF72 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SHROOM3Q8TF72 POLD4-207ENST00000531239 584 ntTSL 2 BASIC17.32■□□□□ 0.36
SHROOM3Q8TF72 AC034105.1-201ENST00000563488 319 ntBASIC17.32■□□□□ 0.36
SHROOM3Q8TF72 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC17.32■□□□□ 0.36
SHROOM3Q8TF72 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC17.32■□□□□ 0.36
SHROOM3Q8TF72 PGM5P2-202ENST00000637225 1043 ntBASIC17.32■□□□□ 0.36
SHROOM3Q8TF72 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SHROOM3Q8TF72 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC17.32■□□□□ 0.36
SHROOM3Q8TF72 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC17.32■□□□□ 0.36
SHROOM3Q8TF72 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC17.32■□□□□ 0.36
SHROOM3Q8TF72 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SHROOM3Q8TF72 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC17.32■□□□□ 0.36
SHROOM3Q8TF72 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SHROOM3Q8TF72 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
SHROOM3Q8TF72 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms