Protein–RNA interactions for Protein: Q8TDI0

CHD5, Chromodomain-helicase-DNA-binding protein 5, humanhuman

Predictions only

Length 1,954 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD5Q8TDI0 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CHD5Q8TDI0 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
CHD5Q8TDI0 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC17.1■□□□□ 0.33
CHD5Q8TDI0 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
CHD5Q8TDI0 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CHD5Q8TDI0 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC17.1■□□□□ 0.33
CHD5Q8TDI0 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CHD5Q8TDI0 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC17.1■□□□□ 0.33
CHD5Q8TDI0 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC17.1■□□□□ 0.33
CHD5Q8TDI0 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC17.1■□□□□ 0.33
CHD5Q8TDI0 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC17.1■□□□□ 0.33
CHD5Q8TDI0 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC17.1■□□□□ 0.33
CHD5Q8TDI0 AC055717.3-201ENST00000622967 595 ntBASIC17.1■□□□□ 0.33
CHD5Q8TDI0 AC106820.2-201ENST00000563775 3264 ntBASIC17.1■□□□□ 0.33
CHD5Q8TDI0 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CHD5Q8TDI0 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CHD5Q8TDI0 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CHD5Q8TDI0 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC17.1■□□□□ 0.33
CHD5Q8TDI0 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC17.1■□□□□ 0.33
CHD5Q8TDI0 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CHD5Q8TDI0 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CHD5Q8TDI0 WASH6P-202ENST00000359512 1437 ntBASIC17.1■□□□□ 0.33
CHD5Q8TDI0 KRT8P39-201ENST00000396270 1433 ntBASIC17.1■□□□□ 0.33
CHD5Q8TDI0 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC17.1■□□□□ 0.33
CHD5Q8TDI0 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CHD5Q8TDI0 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC17.1■□□□□ 0.33
CHD5Q8TDI0 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CHD5Q8TDI0 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CHD5Q8TDI0 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC17.1■□□□□ 0.33
CHD5Q8TDI0 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CHD5Q8TDI0 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC17.09■□□□□ 0.33
CHD5Q8TDI0 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC17.09■□□□□ 0.33
CHD5Q8TDI0 COA5-202ENST00000409997 557 ntTSL 4 BASIC17.09■□□□□ 0.33
CHD5Q8TDI0 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CHD5Q8TDI0 AP000344.2-201ENST00000512987 629 ntBASIC17.09■□□□□ 0.33
CHD5Q8TDI0 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC17.09■□□□□ 0.33
CHD5Q8TDI0 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC17.09■□□□□ 0.33
CHD5Q8TDI0 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC17.09■□□□□ 0.33
CHD5Q8TDI0 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CHD5Q8TDI0 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC17.09■□□□□ 0.33
CHD5Q8TDI0 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC17.09■□□□□ 0.33
CHD5Q8TDI0 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CHD5Q8TDI0 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CHD5Q8TDI0 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CHD5Q8TDI0 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
CHD5Q8TDI0 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
CHD5Q8TDI0 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC17.09■□□□□ 0.33
CHD5Q8TDI0 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CHD5Q8TDI0 PC-204ENST00000524491 1714 ntTSL 2 BASIC17.09■□□□□ 0.33
CHD5Q8TDI0 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
CHD5Q8TDI0 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CHD5Q8TDI0 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CHD5Q8TDI0 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CHD5Q8TDI0 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CHD5Q8TDI0 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CHD5Q8TDI0 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CHD5Q8TDI0 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CHD5Q8TDI0 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC17.09■□□□□ 0.33
CHD5Q8TDI0 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC17.09■□□□□ 0.33
CHD5Q8TDI0 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
CHD5Q8TDI0 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC17.09■□□□□ 0.33
CHD5Q8TDI0 GPX1P2-201ENST00000429271 606 ntBASIC17.09■□□□□ 0.33
CHD5Q8TDI0 HLA-J-202ENST00000469281 1241 ntBASIC17.09■□□□□ 0.33
CHD5Q8TDI0 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CHD5Q8TDI0 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC17.09■□□□□ 0.33
CHD5Q8TDI0 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC17.09■□□□□ 0.33
CHD5Q8TDI0 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC17.09■□□□□ 0.33
CHD5Q8TDI0 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC17.09■□□□□ 0.33
CHD5Q8TDI0 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC17.09■□□□□ 0.33
CHD5Q8TDI0 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC17.09■□□□□ 0.33
CHD5Q8TDI0 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CHD5Q8TDI0 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CHD5Q8TDI0 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC17.09■□□□□ 0.33
CHD5Q8TDI0 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC17.09■□□□□ 0.33
CHD5Q8TDI0 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CHD5Q8TDI0 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
CHD5Q8TDI0 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
CHD5Q8TDI0 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC17.09■□□□□ 0.33
CHD5Q8TDI0 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CHD5Q8TDI0 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CHD5Q8TDI0 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CHD5Q8TDI0 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CHD5Q8TDI0 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
CHD5Q8TDI0 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
CHD5Q8TDI0 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC17.08■□□□□ 0.33
CHD5Q8TDI0 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
CHD5Q8TDI0 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
CHD5Q8TDI0 YBX1P5-201ENST00000509441 847 ntBASIC17.08■□□□□ 0.33
CHD5Q8TDI0 CFL1-202ENST00000524553 860 ntTSL 2 BASIC17.08■□□□□ 0.33
CHD5Q8TDI0 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC17.08■□□□□ 0.33
CHD5Q8TDI0 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC17.08■□□□□ 0.33
CHD5Q8TDI0 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC17.08■□□□□ 0.33
CHD5Q8TDI0 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
CHD5Q8TDI0 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC17.08■□□□□ 0.33
CHD5Q8TDI0 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
CHD5Q8TDI0 NARF-206ENST00000457415 1668 ntTSL 5 BASIC17.08■□□□□ 0.32
CHD5Q8TDI0 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
CHD5Q8TDI0 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CHD5Q8TDI0 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CHD5Q8TDI0 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC17.08■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 63 ms