Protein–RNA interactions for Protein: Q8NFU0

BEST4, Bestrophin-4, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST4Q8NFU0 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
BEST4Q8NFU0 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC14.79□□□□□ -0.04
BEST4Q8NFU0 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC14.79□□□□□ -0.04
BEST4Q8NFU0 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
BEST4Q8NFU0 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
BEST4Q8NFU0 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
BEST4Q8NFU0 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
BEST4Q8NFU0 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC14.79□□□□□ -0.04
BEST4Q8NFU0 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
BEST4Q8NFU0 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
BEST4Q8NFU0 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
BEST4Q8NFU0 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC14.79□□□□□ -0.04
BEST4Q8NFU0 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC14.79□□□□□ -0.04
BEST4Q8NFU0 HES2-202ENST00000377836 507 ntTSL 2 BASIC14.79□□□□□ -0.04
BEST4Q8NFU0 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC14.79□□□□□ -0.04
BEST4Q8NFU0 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC14.79□□□□□ -0.04
BEST4Q8NFU0 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC14.79□□□□□ -0.04
BEST4Q8NFU0 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC14.79□□□□□ -0.04
BEST4Q8NFU0 AC098590.1-201ENST00000468126 897 ntBASIC14.79□□□□□ -0.04
BEST4Q8NFU0 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
BEST4Q8NFU0 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
BEST4Q8NFU0 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC14.79□□□□□ -0.04
BEST4Q8NFU0 EGLN1P1-201ENST00000531623 762 ntBASIC14.79□□□□□ -0.04
BEST4Q8NFU0 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC14.79□□□□□ -0.04
BEST4Q8NFU0 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
BEST4Q8NFU0 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
BEST4Q8NFU0 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC14.79□□□□□ -0.04
BEST4Q8NFU0 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC14.79□□□□□ -0.04
BEST4Q8NFU0 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC14.79□□□□□ -0.04
BEST4Q8NFU0 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
BEST4Q8NFU0 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC14.78□□□□□ -0.04
BEST4Q8NFU0 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
BEST4Q8NFU0 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
BEST4Q8NFU0 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
BEST4Q8NFU0 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
BEST4Q8NFU0 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC14.78□□□□□ -0.04
BEST4Q8NFU0 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC14.78□□□□□ -0.04
BEST4Q8NFU0 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC14.78□□□□□ -0.04
BEST4Q8NFU0 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
BEST4Q8NFU0 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
BEST4Q8NFU0 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
BEST4Q8NFU0 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC14.78□□□□□ -0.04
BEST4Q8NFU0 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
BEST4Q8NFU0 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
BEST4Q8NFU0 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
BEST4Q8NFU0 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
BEST4Q8NFU0 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
BEST4Q8NFU0 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC14.78□□□□□ -0.04
BEST4Q8NFU0 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
BEST4Q8NFU0 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
BEST4Q8NFU0 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC14.78□□□□□ -0.04
BEST4Q8NFU0 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
BEST4Q8NFU0 KRT89P-201ENST00000620027 1478 ntBASIC14.78□□□□□ -0.04
BEST4Q8NFU0 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC14.78□□□□□ -0.04
BEST4Q8NFU0 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC14.78□□□□□ -0.04
BEST4Q8NFU0 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
BEST4Q8NFU0 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
BEST4Q8NFU0 MME-217ENST00000616757 1315 ntTSL 5 BASIC14.78□□□□□ -0.04
BEST4Q8NFU0 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
BEST4Q8NFU0 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
BEST4Q8NFU0 GCSHP5-201ENST00000443090 522 ntBASIC14.78□□□□□ -0.04
BEST4Q8NFU0 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
BEST4Q8NFU0 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC14.78□□□□□ -0.04
BEST4Q8NFU0 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC14.78□□□□□ -0.04
BEST4Q8NFU0 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC14.78□□□□□ -0.04
BEST4Q8NFU0 MIR4785-201ENST00000585005 73 ntBASIC14.78□□□□□ -0.04
BEST4Q8NFU0 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC14.78□□□□□ -0.04
BEST4Q8NFU0 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC14.78□□□□□ -0.04
BEST4Q8NFU0 AC024563.2-201ENST00000603282 481 ntBASIC14.78□□□□□ -0.04
BEST4Q8NFU0 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
BEST4Q8NFU0 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC14.78□□□□□ -0.04
BEST4Q8NFU0 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
BEST4Q8NFU0 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
BEST4Q8NFU0 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
BEST4Q8NFU0 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
BEST4Q8NFU0 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
BEST4Q8NFU0 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
BEST4Q8NFU0 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
BEST4Q8NFU0 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
BEST4Q8NFU0 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
BEST4Q8NFU0 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC14.78□□□□□ -0.04
BEST4Q8NFU0 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
BEST4Q8NFU0 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
BEST4Q8NFU0 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
BEST4Q8NFU0 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC14.77□□□□□ -0.04
BEST4Q8NFU0 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
BEST4Q8NFU0 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC14.77□□□□□ -0.04
BEST4Q8NFU0 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC14.77□□□□□ -0.04
BEST4Q8NFU0 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
BEST4Q8NFU0 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
BEST4Q8NFU0 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC14.77□□□□□ -0.04
BEST4Q8NFU0 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
BEST4Q8NFU0 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
BEST4Q8NFU0 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
BEST4Q8NFU0 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC14.77□□□□□ -0.04
BEST4Q8NFU0 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
BEST4Q8NFU0 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC14.77□□□□□ -0.04
BEST4Q8NFU0 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
BEST4Q8NFU0 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC14.77□□□□□ -0.04
BEST4Q8NFU0 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC14.77□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 53.4 ms