Protein–RNA interactions for Protein: Q8NEF9

SRFBP1, Serum response factor-binding protein 1, humanhuman

Known RBP Predictions only

Length 429 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1Q8NEF9 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SRFBP1Q8NEF9 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SRFBP1Q8NEF9 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC16.29■□□□□ 0.2
SRFBP1Q8NEF9 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
SRFBP1Q8NEF9 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SRFBP1Q8NEF9 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SRFBP1Q8NEF9 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SRFBP1Q8NEF9 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC16.28■□□□□ 0.2
SRFBP1Q8NEF9 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SRFBP1Q8NEF9 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC16.28■□□□□ 0.2
SRFBP1Q8NEF9 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SRFBP1Q8NEF9 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
SRFBP1Q8NEF9 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SRFBP1Q8NEF9 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
SRFBP1Q8NEF9 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC16.28■□□□□ 0.2
SRFBP1Q8NEF9 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
SRFBP1Q8NEF9 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
SRFBP1Q8NEF9 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SRFBP1Q8NEF9 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
SRFBP1Q8NEF9 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
SRFBP1Q8NEF9 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
SRFBP1Q8NEF9 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SRFBP1Q8NEF9 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC16.28■□□□□ 0.2
SRFBP1Q8NEF9 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SRFBP1Q8NEF9 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC16.28■□□□□ 0.2
SRFBP1Q8NEF9 AP002490.2-201ENST00000524791 560 ntBASIC16.28■□□□□ 0.2
SRFBP1Q8NEF9 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC16.28■□□□□ 0.2
SRFBP1Q8NEF9 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC16.28■□□□□ 0.2
SRFBP1Q8NEF9 ETFA-208ENST00000559602 792 ntTSL 3 BASIC16.28■□□□□ 0.2
SRFBP1Q8NEF9 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC16.28■□□□□ 0.2
SRFBP1Q8NEF9 GGTLC5P-201ENST00000617623 998 ntBASIC16.28■□□□□ 0.2
SRFBP1Q8NEF9 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
SRFBP1Q8NEF9 AL031008.1-201ENST00000619963 541 ntBASIC16.28■□□□□ 0.2
SRFBP1Q8NEF9 TP73-AS1-207ENST00000624167 988 ntBASIC16.28■□□□□ 0.2
SRFBP1Q8NEF9 AL805961.1-202ENST00000641562 540 ntBASIC16.28■□□□□ 0.2
SRFBP1Q8NEF9 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SRFBP1Q8NEF9 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC16.28■□□□□ 0.2
SRFBP1Q8NEF9 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SRFBP1Q8NEF9 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SRFBP1Q8NEF9 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SRFBP1Q8NEF9 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SRFBP1Q8NEF9 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SRFBP1Q8NEF9 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
SRFBP1Q8NEF9 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC16.28■□□□□ 0.2
SRFBP1Q8NEF9 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC16.28■□□□□ 0.2
SRFBP1Q8NEF9 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SRFBP1Q8NEF9 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC16.28■□□□□ 0.2
SRFBP1Q8NEF9 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SRFBP1Q8NEF9 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SRFBP1Q8NEF9 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
SRFBP1Q8NEF9 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
SRFBP1Q8NEF9 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SRFBP1Q8NEF9 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
SRFBP1Q8NEF9 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
SRFBP1Q8NEF9 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
SRFBP1Q8NEF9 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
SRFBP1Q8NEF9 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.2
SRFBP1Q8NEF9 AC243591.1-201ENST00000452967 1364 ntBASIC16.27■□□□□ 0.2
SRFBP1Q8NEF9 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SRFBP1Q8NEF9 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SRFBP1Q8NEF9 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SRFBP1Q8NEF9 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.2
SRFBP1Q8NEF9 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
SRFBP1Q8NEF9 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
SRFBP1Q8NEF9 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
SRFBP1Q8NEF9 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SRFBP1Q8NEF9 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC16.27■□□□□ 0.2
SRFBP1Q8NEF9 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SRFBP1Q8NEF9 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC16.27■□□□□ 0.2
SRFBP1Q8NEF9 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SRFBP1Q8NEF9 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SRFBP1Q8NEF9 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC16.27■□□□□ 0.2
SRFBP1Q8NEF9 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
SRFBP1Q8NEF9 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC16.27■□□□□ 0.2
SRFBP1Q8NEF9 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC16.27■□□□□ 0.2
SRFBP1Q8NEF9 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
SRFBP1Q8NEF9 AC079781.3-201ENST00000449110 356 ntBASIC16.27■□□□□ 0.2
SRFBP1Q8NEF9 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
SRFBP1Q8NEF9 PPIE-208ENST00000470213 927 ntTSL 3 BASIC16.27■□□□□ 0.2
SRFBP1Q8NEF9 AC136632.2-201ENST00000512891 861 ntBASIC16.27■□□□□ 0.2
SRFBP1Q8NEF9 AL662844.1-201ENST00000546340 181 ntBASIC16.27■□□□□ 0.2
SRFBP1Q8NEF9 AC105339.3-201ENST00000560043 636 ntBASIC16.27■□□□□ 0.2
SRFBP1Q8NEF9 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC16.27■□□□□ 0.2
SRFBP1Q8NEF9 PAM16-208ENST00000573553 722 ntTSL 2 BASIC16.27■□□□□ 0.2
SRFBP1Q8NEF9 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SRFBP1Q8NEF9 TERC-201ENST00000602385 541 ntBASIC16.27■□□□□ 0.2
SRFBP1Q8NEF9 AL773604.1-201ENST00000617417 272 ntBASIC16.27■□□□□ 0.2
SRFBP1Q8NEF9 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
SRFBP1Q8NEF9 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC16.27■□□□□ 0.19
SRFBP1Q8NEF9 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
SRFBP1Q8NEF9 AC092053.1-201ENST00000605787 1936 ntBASIC16.27■□□□□ 0.19
SRFBP1Q8NEF9 HNRNPRP1-201ENST00000453465 1695 ntBASIC16.27■□□□□ 0.19
SRFBP1Q8NEF9 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
SRFBP1Q8NEF9 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
SRFBP1Q8NEF9 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
SRFBP1Q8NEF9 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
SRFBP1Q8NEF9 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
SRFBP1Q8NEF9 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC16.26■□□□□ 0.19
SRFBP1Q8NEF9 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
SRFBP1Q8NEF9 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms