Protein–RNA interactions for Protein: Q8NE63

HIPK4, Homeodomain-interacting protein kinase 4, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK4Q8NE63 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
HIPK4Q8NE63 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
HIPK4Q8NE63 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC16.63■□□□□ 0.25
HIPK4Q8NE63 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
HIPK4Q8NE63 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HIPK4Q8NE63 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC16.63■□□□□ 0.25
HIPK4Q8NE63 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
HIPK4Q8NE63 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HIPK4Q8NE63 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HIPK4Q8NE63 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC16.63■□□□□ 0.25
HIPK4Q8NE63 HES2-202ENST00000377836 507 ntTSL 2 BASIC16.63■□□□□ 0.25
HIPK4Q8NE63 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC16.63■□□□□ 0.25
HIPK4Q8NE63 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
HIPK4Q8NE63 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC16.63■□□□□ 0.25
HIPK4Q8NE63 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC16.63■□□□□ 0.25
HIPK4Q8NE63 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC16.63■□□□□ 0.25
HIPK4Q8NE63 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HIPK4Q8NE63 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
HIPK4Q8NE63 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
HIPK4Q8NE63 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC16.63■□□□□ 0.25
HIPK4Q8NE63 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC16.62■□□□□ 0.25
HIPK4Q8NE63 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
HIPK4Q8NE63 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
HIPK4Q8NE63 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
HIPK4Q8NE63 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
HIPK4Q8NE63 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC16.62■□□□□ 0.25
HIPK4Q8NE63 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HIPK4Q8NE63 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC16.62■□□□□ 0.25
HIPK4Q8NE63 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HIPK4Q8NE63 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC16.62■□□□□ 0.25
HIPK4Q8NE63 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC16.62■□□□□ 0.25
HIPK4Q8NE63 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
HIPK4Q8NE63 ING5-213ENST00000636051 4199 ntTSL 5 BASIC16.62■□□□□ 0.25
HIPK4Q8NE63 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC16.62■□□□□ 0.25
HIPK4Q8NE63 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC16.62■□□□□ 0.25
HIPK4Q8NE63 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC16.62■□□□□ 0.25
HIPK4Q8NE63 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
HIPK4Q8NE63 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
HIPK4Q8NE63 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC16.62■□□□□ 0.25
HIPK4Q8NE63 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
HIPK4Q8NE63 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC16.62■□□□□ 0.25
HIPK4Q8NE63 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC16.62■□□□□ 0.25
HIPK4Q8NE63 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
HIPK4Q8NE63 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
HIPK4Q8NE63 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC16.62■□□□□ 0.25
HIPK4Q8NE63 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC16.62■□□□□ 0.25
HIPK4Q8NE63 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
HIPK4Q8NE63 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC16.62■□□□□ 0.25
HIPK4Q8NE63 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC16.62■□□□□ 0.25
HIPK4Q8NE63 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC16.62■□□□□ 0.25
HIPK4Q8NE63 TK1-205ENST00000590862 642 ntTSL 3 BASIC16.62■□□□□ 0.25
HIPK4Q8NE63 AC141257.4-201ENST00000634557 245 ntBASIC16.62■□□□□ 0.25
HIPK4Q8NE63 AC136944.6-201ENST00000634818 245 ntBASIC16.62■□□□□ 0.25
HIPK4Q8NE63 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC16.62■□□□□ 0.25
HIPK4Q8NE63 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC16.62■□□□□ 0.25
HIPK4Q8NE63 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HIPK4Q8NE63 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
HIPK4Q8NE63 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HIPK4Q8NE63 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
HIPK4Q8NE63 LINC01568-207ENST00000641790 1380 ntBASIC16.62■□□□□ 0.25
HIPK4Q8NE63 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HIPK4Q8NE63 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HIPK4Q8NE63 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HIPK4Q8NE63 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HIPK4Q8NE63 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
HIPK4Q8NE63 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC16.62■□□□□ 0.25
HIPK4Q8NE63 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HIPK4Q8NE63 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HIPK4Q8NE63 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HIPK4Q8NE63 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
HIPK4Q8NE63 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
HIPK4Q8NE63 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HIPK4Q8NE63 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HIPK4Q8NE63 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC16.61■□□□□ 0.25
HIPK4Q8NE63 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HIPK4Q8NE63 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
HIPK4Q8NE63 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC16.61■□□□□ 0.25
HIPK4Q8NE63 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
HIPK4Q8NE63 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HIPK4Q8NE63 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
HIPK4Q8NE63 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC16.61■□□□□ 0.25
HIPK4Q8NE63 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HIPK4Q8NE63 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
HIPK4Q8NE63 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HIPK4Q8NE63 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC16.61■□□□□ 0.25
HIPK4Q8NE63 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
HIPK4Q8NE63 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC16.61■□□□□ 0.25
HIPK4Q8NE63 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC16.61■□□□□ 0.25
HIPK4Q8NE63 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC16.61■□□□□ 0.25
HIPK4Q8NE63 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC16.61■□□□□ 0.25
HIPK4Q8NE63 CD81-212ENST00000526072 1172 ntTSL 5 BASIC16.61■□□□□ 0.25
HIPK4Q8NE63 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC16.61■□□□□ 0.25
HIPK4Q8NE63 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC16.61■□□□□ 0.25
HIPK4Q8NE63 GCSHP2-201ENST00000560971 527 ntBASIC16.61■□□□□ 0.25
HIPK4Q8NE63 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC16.61■□□□□ 0.25
HIPK4Q8NE63 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HIPK4Q8NE63 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC16.61■□□□□ 0.25
HIPK4Q8NE63 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
HIPK4Q8NE63 KRT18P22-201ENST00000402024 1347 ntBASIC16.61■□□□□ 0.25
HIPK4Q8NE63 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms