Protein–RNA interactions for Protein: Q8ND23

CARMIL3, Capping protein, Arp2/3 and myosin-I linker protein 3, humanhuman

Predictions only

Length 1,372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3Q8ND23 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CARMIL3Q8ND23 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC21.21■□□□□ 0.99
CARMIL3Q8ND23 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
CARMIL3Q8ND23 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CARMIL3Q8ND23 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CARMIL3Q8ND23 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC21.2■□□□□ 0.98
CARMIL3Q8ND23 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CARMIL3Q8ND23 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC21.2■□□□□ 0.98
CARMIL3Q8ND23 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC21.2■□□□□ 0.98
CARMIL3Q8ND23 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CARMIL3Q8ND23 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CARMIL3Q8ND23 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC21.2■□□□□ 0.98
CARMIL3Q8ND23 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CARMIL3Q8ND23 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC21.2■□□□□ 0.98
CARMIL3Q8ND23 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC21.2■□□□□ 0.98
CARMIL3Q8ND23 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
CARMIL3Q8ND23 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC21.2■□□□□ 0.98
CARMIL3Q8ND23 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC21.2■□□□□ 0.98
CARMIL3Q8ND23 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
CARMIL3Q8ND23 SPDYE22P-201ENST00000582158 798 ntBASIC21.2■□□□□ 0.98
CARMIL3Q8ND23 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
CARMIL3Q8ND23 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
CARMIL3Q8ND23 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CARMIL3Q8ND23 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CARMIL3Q8ND23 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CARMIL3Q8ND23 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC21.2■□□□□ 0.98
CARMIL3Q8ND23 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CARMIL3Q8ND23 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC21.19■□□□□ 0.98
CARMIL3Q8ND23 AC020763.4-201ENST00000623414 4170 ntBASIC21.19■□□□□ 0.98
CARMIL3Q8ND23 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC21.19■□□□□ 0.98
CARMIL3Q8ND23 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CARMIL3Q8ND23 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC21.19■□□□□ 0.98
CARMIL3Q8ND23 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CARMIL3Q8ND23 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC21.19■□□□□ 0.98
CARMIL3Q8ND23 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
CARMIL3Q8ND23 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
CARMIL3Q8ND23 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CARMIL3Q8ND23 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
CARMIL3Q8ND23 TMPRSS11CP-201ENST00000453277 683 ntBASIC21.19■□□□□ 0.98
CARMIL3Q8ND23 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC21.19■□□□□ 0.98
CARMIL3Q8ND23 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CARMIL3Q8ND23 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC21.19■□□□□ 0.98
CARMIL3Q8ND23 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC21.19■□□□□ 0.98
CARMIL3Q8ND23 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
CARMIL3Q8ND23 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CARMIL3Q8ND23 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CARMIL3Q8ND23 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CARMIL3Q8ND23 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC21.19■□□□□ 0.98
CARMIL3Q8ND23 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CARMIL3Q8ND23 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
CARMIL3Q8ND23 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CARMIL3Q8ND23 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CARMIL3Q8ND23 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CARMIL3Q8ND23 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
CARMIL3Q8ND23 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CARMIL3Q8ND23 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC21.18■□□□□ 0.98
CARMIL3Q8ND23 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CARMIL3Q8ND23 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC21.18■□□□□ 0.98
CARMIL3Q8ND23 AC016027.1-202ENST00000607927 1699 ntBASIC21.18■□□□□ 0.98
CARMIL3Q8ND23 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CARMIL3Q8ND23 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
CARMIL3Q8ND23 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CARMIL3Q8ND23 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
CARMIL3Q8ND23 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
CARMIL3Q8ND23 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
CARMIL3Q8ND23 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CARMIL3Q8ND23 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC21.18■□□□□ 0.98
CARMIL3Q8ND23 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC21.18■□□□□ 0.98
CARMIL3Q8ND23 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC21.18■□□□□ 0.98
CARMIL3Q8ND23 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CARMIL3Q8ND23 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
CARMIL3Q8ND23 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC21.18■□□□□ 0.98
CARMIL3Q8ND23 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC21.18■□□□□ 0.98
CARMIL3Q8ND23 AC025048.6-201ENST00000634326 1161 ntBASIC21.18■□□□□ 0.98
CARMIL3Q8ND23 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC21.18■□□□□ 0.98
CARMIL3Q8ND23 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CARMIL3Q8ND23 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC21.18■□□□□ 0.98
CARMIL3Q8ND23 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CARMIL3Q8ND23 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CARMIL3Q8ND23 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CARMIL3Q8ND23 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC21.18■□□□□ 0.98
CARMIL3Q8ND23 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CARMIL3Q8ND23 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CARMIL3Q8ND23 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CARMIL3Q8ND23 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CARMIL3Q8ND23 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CARMIL3Q8ND23 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC21.17■□□□□ 0.98
CARMIL3Q8ND23 COX5BP8-201ENST00000416911 349 ntBASIC21.17■□□□□ 0.98
CARMIL3Q8ND23 TSSK5P-201ENST00000423978 907 ntBASIC21.17■□□□□ 0.98
CARMIL3Q8ND23 AC241585.1-201ENST00000433527 519 ntBASIC21.17■□□□□ 0.98
CARMIL3Q8ND23 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC21.17■□□□□ 0.98
CARMIL3Q8ND23 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC21.17■□□□□ 0.98
CARMIL3Q8ND23 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC21.17■□□□□ 0.98
CARMIL3Q8ND23 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC21.17■□□□□ 0.98
CARMIL3Q8ND23 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CARMIL3Q8ND23 TOP3BP1-201ENST00000420768 1380 ntBASIC21.17■□□□□ 0.98
CARMIL3Q8ND23 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
CARMIL3Q8ND23 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
CARMIL3Q8ND23 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
CARMIL3Q8ND23 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 59.2 ms