Protein–RNA interactions for Protein: Q8IZ52

CHPF, Chondroitin sulfate synthase 2, humanhuman

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHPFQ8IZ52 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
CHPFQ8IZ52 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC17.35■□□□□ 0.37
CHPFQ8IZ52 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
CHPFQ8IZ52 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CHPFQ8IZ52 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CHPFQ8IZ52 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CHPFQ8IZ52 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CHPFQ8IZ52 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CHPFQ8IZ52 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CHPFQ8IZ52 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
CHPFQ8IZ52 FST-202ENST00000396947 2538 ntTSL 5 BASIC17.35■□□□□ 0.37
CHPFQ8IZ52 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
CHPFQ8IZ52 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CHPFQ8IZ52 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CHPFQ8IZ52 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
CHPFQ8IZ52 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CHPFQ8IZ52 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CHPFQ8IZ52 STOM-202ENST00000347359 870 ntTSL 2 BASIC17.34■□□□□ 0.37
CHPFQ8IZ52 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC17.34■□□□□ 0.37
CHPFQ8IZ52 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC17.34■□□□□ 0.37
CHPFQ8IZ52 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC17.34■□□□□ 0.37
CHPFQ8IZ52 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CHPFQ8IZ52 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CHPFQ8IZ52 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CHPFQ8IZ52 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC17.34■□□□□ 0.37
CHPFQ8IZ52 TSEN15P1-201ENST00000423257 515 ntBASIC17.34■□□□□ 0.37
CHPFQ8IZ52 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CHPFQ8IZ52 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC17.34■□□□□ 0.37
CHPFQ8IZ52 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC17.34■□□□□ 0.37
CHPFQ8IZ52 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CHPFQ8IZ52 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC17.34■□□□□ 0.37
CHPFQ8IZ52 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC17.34■□□□□ 0.37
CHPFQ8IZ52 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
CHPFQ8IZ52 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC17.34■□□□□ 0.37
CHPFQ8IZ52 METTL23-205ENST00000588302 925 ntTSL 5 BASIC17.34■□□□□ 0.37
CHPFQ8IZ52 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CHPFQ8IZ52 AC106028.4-201ENST00000614509 607 ntBASIC17.34■□□□□ 0.37
CHPFQ8IZ52 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC17.34■□□□□ 0.37
CHPFQ8IZ52 AL513210.1-201ENST00000629608 234 ntBASIC17.34■□□□□ 0.37
CHPFQ8IZ52 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CHPFQ8IZ52 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
CHPFQ8IZ52 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CHPFQ8IZ52 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CHPFQ8IZ52 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CHPFQ8IZ52 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC17.33■□□□□ 0.37
CHPFQ8IZ52 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.37
CHPFQ8IZ52 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC17.33■□□□□ 0.37
CHPFQ8IZ52 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
CHPFQ8IZ52 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CHPFQ8IZ52 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.37
CHPFQ8IZ52 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
CHPFQ8IZ52 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.37
CHPFQ8IZ52 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CHPFQ8IZ52 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC17.33■□□□□ 0.37
CHPFQ8IZ52 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC17.33■□□□□ 0.37
CHPFQ8IZ52 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC17.33■□□□□ 0.37
CHPFQ8IZ52 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC17.33■□□□□ 0.36
CHPFQ8IZ52 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CHPFQ8IZ52 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
CHPFQ8IZ52 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
CHPFQ8IZ52 FALEC-201ENST00000416894 566 ntTSL 3 BASIC17.33■□□□□ 0.36
CHPFQ8IZ52 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CHPFQ8IZ52 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC17.33■□□□□ 0.36
CHPFQ8IZ52 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC17.33■□□□□ 0.36
CHPFQ8IZ52 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CHPFQ8IZ52 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
CHPFQ8IZ52 AC105339.1-204ENST00000636249 355 ntBASIC17.33■□□□□ 0.36
CHPFQ8IZ52 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
CHPFQ8IZ52 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
CHPFQ8IZ52 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
CHPFQ8IZ52 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC17.33■□□□□ 0.36
CHPFQ8IZ52 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CHPFQ8IZ52 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC17.33■□□□□ 0.36
CHPFQ8IZ52 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
CHPFQ8IZ52 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CHPFQ8IZ52 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
CHPFQ8IZ52 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC17.33■□□□□ 0.36
CHPFQ8IZ52 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CHPFQ8IZ52 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CHPFQ8IZ52 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CHPFQ8IZ52 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CHPFQ8IZ52 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CHPFQ8IZ52 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC17.32■□□□□ 0.36
CHPFQ8IZ52 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CHPFQ8IZ52 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CHPFQ8IZ52 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CHPFQ8IZ52 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CHPFQ8IZ52 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CHPFQ8IZ52 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CHPFQ8IZ52 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CHPFQ8IZ52 AC004461.1-201ENST00000412461 403 ntBASIC17.32■□□□□ 0.36
CHPFQ8IZ52 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC17.32■□□□□ 0.36
CHPFQ8IZ52 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CHPFQ8IZ52 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC17.32■□□□□ 0.36
CHPFQ8IZ52 RPL28-209ENST00000560055 670 ntTSL 3 BASIC17.32■□□□□ 0.36
CHPFQ8IZ52 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC17.32■□□□□ 0.36
CHPFQ8IZ52 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC17.32■□□□□ 0.36
CHPFQ8IZ52 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC17.32■□□□□ 0.36
CHPFQ8IZ52 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC17.32■□□□□ 0.36
CHPFQ8IZ52 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms