Protein–RNA interactions for Protein: Q8IYA2

CCDC144CP, Putative coiled-coil domain-containing protein 144C, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144CPQ8IYA2 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
CCDC144CPQ8IYA2 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CCDC144CPQ8IYA2 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CCDC144CPQ8IYA2 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
CCDC144CPQ8IYA2 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CCDC144CPQ8IYA2 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CCDC144CPQ8IYA2 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CCDC144CPQ8IYA2 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
CCDC144CPQ8IYA2 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CCDC144CPQ8IYA2 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CCDC144CPQ8IYA2 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC20.16■□□□□ 0.82
CCDC144CPQ8IYA2 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CCDC144CPQ8IYA2 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
CCDC144CPQ8IYA2 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CCDC144CPQ8IYA2 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CCDC144CPQ8IYA2 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CCDC144CPQ8IYA2 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CCDC144CPQ8IYA2 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CCDC144CPQ8IYA2 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CCDC144CPQ8IYA2 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CCDC144CPQ8IYA2 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CCDC144CPQ8IYA2 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CCDC144CPQ8IYA2 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CCDC144CPQ8IYA2 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
CCDC144CPQ8IYA2 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC20.16■□□□□ 0.82
CCDC144CPQ8IYA2 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC20.16■□□□□ 0.82
CCDC144CPQ8IYA2 AL591424.1-201ENST00000442569 1213 ntBASIC20.16■□□□□ 0.82
CCDC144CPQ8IYA2 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC20.16■□□□□ 0.82
CCDC144CPQ8IYA2 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC20.16■□□□□ 0.82
CCDC144CPQ8IYA2 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC20.16■□□□□ 0.82
CCDC144CPQ8IYA2 UNC93B6-202ENST00000528242 690 ntBASIC20.16■□□□□ 0.82
CCDC144CPQ8IYA2 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CCDC144CPQ8IYA2 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC20.16■□□□□ 0.82
CCDC144CPQ8IYA2 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC20.16■□□□□ 0.82
CCDC144CPQ8IYA2 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
CCDC144CPQ8IYA2 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CCDC144CPQ8IYA2 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CCDC144CPQ8IYA2 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
CCDC144CPQ8IYA2 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC20.16■□□□□ 0.82
CCDC144CPQ8IYA2 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
CCDC144CPQ8IYA2 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CCDC144CPQ8IYA2 RHBDF1P1-201ENST00000427504 1941 ntBASIC20.15■□□□□ 0.82
CCDC144CPQ8IYA2 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CCDC144CPQ8IYA2 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
CCDC144CPQ8IYA2 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
CCDC144CPQ8IYA2 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC20.15■□□□□ 0.82
CCDC144CPQ8IYA2 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC20.15■□□□□ 0.82
CCDC144CPQ8IYA2 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CCDC144CPQ8IYA2 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CCDC144CPQ8IYA2 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC20.15■□□□□ 0.82
CCDC144CPQ8IYA2 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC20.15■□□□□ 0.82
CCDC144CPQ8IYA2 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC20.15■□□□□ 0.82
CCDC144CPQ8IYA2 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CCDC144CPQ8IYA2 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
CCDC144CPQ8IYA2 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CCDC144CPQ8IYA2 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CCDC144CPQ8IYA2 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CCDC144CPQ8IYA2 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
CCDC144CPQ8IYA2 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
CCDC144CPQ8IYA2 AC060834.1-201ENST00000443027 2032 ntBASIC20.15■□□□□ 0.82
CCDC144CPQ8IYA2 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
CCDC144CPQ8IYA2 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CCDC144CPQ8IYA2 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
CCDC144CPQ8IYA2 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.82
CCDC144CPQ8IYA2 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.82
CCDC144CPQ8IYA2 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC20.14■□□□□ 0.82
CCDC144CPQ8IYA2 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC20.14■□□□□ 0.81
CCDC144CPQ8IYA2 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
CCDC144CPQ8IYA2 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
CCDC144CPQ8IYA2 NCF1C-201ENST00000438382 1427 ntBASIC20.14■□□□□ 0.81
CCDC144CPQ8IYA2 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CCDC144CPQ8IYA2 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC20.14■□□□□ 0.81
CCDC144CPQ8IYA2 KRT18P3-201ENST00000451602 1288 ntBASIC20.14■□□□□ 0.81
CCDC144CPQ8IYA2 NMU-202ENST00000505262 693 ntTSL 3 BASIC20.14■□□□□ 0.81
CCDC144CPQ8IYA2 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC20.14■□□□□ 0.81
CCDC144CPQ8IYA2 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC20.14■□□□□ 0.81
CCDC144CPQ8IYA2 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC20.14■□□□□ 0.81
CCDC144CPQ8IYA2 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
CCDC144CPQ8IYA2 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC20.14■□□□□ 0.81
CCDC144CPQ8IYA2 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC20.14■□□□□ 0.81
CCDC144CPQ8IYA2 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CCDC144CPQ8IYA2 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CCDC144CPQ8IYA2 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
CCDC144CPQ8IYA2 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC20.14■□□□□ 0.81
CCDC144CPQ8IYA2 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CCDC144CPQ8IYA2 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CCDC144CPQ8IYA2 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CCDC144CPQ8IYA2 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CCDC144CPQ8IYA2 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CCDC144CPQ8IYA2 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
CCDC144CPQ8IYA2 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
CCDC144CPQ8IYA2 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CCDC144CPQ8IYA2 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
CCDC144CPQ8IYA2 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CCDC144CPQ8IYA2 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CCDC144CPQ8IYA2 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CCDC144CPQ8IYA2 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
CCDC144CPQ8IYA2 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC20.13■□□□□ 0.81
CCDC144CPQ8IYA2 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC20.13■□□□□ 0.81
CCDC144CPQ8IYA2 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC20.13■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms