Protein–RNA interactions for Protein: Q8IWT1

SCN4B, Sodium channel subunit beta-4, humanhuman

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4BQ8IWT1 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SCN4BQ8IWT1 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC17.95■□□□□ 0.46
SCN4BQ8IWT1 AC004967.1-201ENST00000453589 447 ntBASIC17.95■□□□□ 0.46
SCN4BQ8IWT1 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC17.95■□□□□ 0.46
SCN4BQ8IWT1 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC17.95■□□□□ 0.46
SCN4BQ8IWT1 MED16-214ENST00000617672 554 ntTSL 5 BASIC17.95■□□□□ 0.46
SCN4BQ8IWT1 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SCN4BQ8IWT1 AC134684.3-201ENST00000641758 218 ntBASIC17.95■□□□□ 0.46
SCN4BQ8IWT1 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SCN4BQ8IWT1 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC17.95■□□□□ 0.46
SCN4BQ8IWT1 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC17.95■□□□□ 0.46
SCN4BQ8IWT1 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
SCN4BQ8IWT1 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC17.95■□□□□ 0.46
SCN4BQ8IWT1 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SCN4BQ8IWT1 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
SCN4BQ8IWT1 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SCN4BQ8IWT1 REM2-202ENST00000536884 1331 ntTSL 2 BASIC17.95■□□□□ 0.46
SCN4BQ8IWT1 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SCN4BQ8IWT1 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC17.95■□□□□ 0.46
SCN4BQ8IWT1 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC17.95■□□□□ 0.46
SCN4BQ8IWT1 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SCN4BQ8IWT1 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC17.95■□□□□ 0.46
SCN4BQ8IWT1 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SCN4BQ8IWT1 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SCN4BQ8IWT1 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
SCN4BQ8IWT1 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SCN4BQ8IWT1 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SCN4BQ8IWT1 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SCN4BQ8IWT1 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC17.94■□□□□ 0.46
SCN4BQ8IWT1 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC17.94■□□□□ 0.46
SCN4BQ8IWT1 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC17.94■□□□□ 0.46
SCN4BQ8IWT1 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC17.94■□□□□ 0.46
SCN4BQ8IWT1 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
SCN4BQ8IWT1 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
SCN4BQ8IWT1 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
SCN4BQ8IWT1 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
SCN4BQ8IWT1 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SCN4BQ8IWT1 AC211486.1-202ENST00000416371 468 ntBASIC17.94■□□□□ 0.46
SCN4BQ8IWT1 HTR5BP-201ENST00000430851 1154 ntBASIC17.94■□□□□ 0.46
SCN4BQ8IWT1 FAM58CP-201ENST00000435741 640 ntBASIC17.94■□□□□ 0.46
SCN4BQ8IWT1 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
SCN4BQ8IWT1 AC211476.1-201ENST00000503899 468 ntBASIC17.94■□□□□ 0.46
SCN4BQ8IWT1 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC17.94■□□□□ 0.46
SCN4BQ8IWT1 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC17.94■□□□□ 0.46
SCN4BQ8IWT1 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC17.94■□□□□ 0.46
SCN4BQ8IWT1 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC17.94■□□□□ 0.46
SCN4BQ8IWT1 MIR4469-201ENST00000583919 79 ntBASIC17.94■□□□□ 0.46
SCN4BQ8IWT1 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC17.94■□□□□ 0.46
SCN4BQ8IWT1 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
SCN4BQ8IWT1 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SCN4BQ8IWT1 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SCN4BQ8IWT1 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC17.94■□□□□ 0.46
SCN4BQ8IWT1 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
SCN4BQ8IWT1 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
SCN4BQ8IWT1 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
SCN4BQ8IWT1 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC17.94■□□□□ 0.46
SCN4BQ8IWT1 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
SCN4BQ8IWT1 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SCN4BQ8IWT1 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SCN4BQ8IWT1 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SCN4BQ8IWT1 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
SCN4BQ8IWT1 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
SCN4BQ8IWT1 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC17.93■□□□□ 0.46
SCN4BQ8IWT1 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
SCN4BQ8IWT1 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SCN4BQ8IWT1 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
SCN4BQ8IWT1 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SCN4BQ8IWT1 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
SCN4BQ8IWT1 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SCN4BQ8IWT1 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC17.93■□□□□ 0.46
SCN4BQ8IWT1 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
SCN4BQ8IWT1 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SCN4BQ8IWT1 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC17.93■□□□□ 0.46
SCN4BQ8IWT1 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC17.93■□□□□ 0.46
SCN4BQ8IWT1 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC17.93■□□□□ 0.46
SCN4BQ8IWT1 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SCN4BQ8IWT1 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
SCN4BQ8IWT1 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC17.93■□□□□ 0.46
SCN4BQ8IWT1 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC17.93■□□□□ 0.46
SCN4BQ8IWT1 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
SCN4BQ8IWT1 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SCN4BQ8IWT1 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
SCN4BQ8IWT1 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC17.93■□□□□ 0.46
SCN4BQ8IWT1 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC17.93■□□□□ 0.46
SCN4BQ8IWT1 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SCN4BQ8IWT1 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SCN4BQ8IWT1 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SCN4BQ8IWT1 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SCN4BQ8IWT1 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
SCN4BQ8IWT1 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC17.93■□□□□ 0.46
SCN4BQ8IWT1 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SCN4BQ8IWT1 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SCN4BQ8IWT1 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
SCN4BQ8IWT1 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC17.93■□□□□ 0.46
SCN4BQ8IWT1 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SCN4BQ8IWT1 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC17.92■□□□□ 0.46
SCN4BQ8IWT1 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SCN4BQ8IWT1 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SCN4BQ8IWT1 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SCN4BQ8IWT1 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms