Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
NUDCD3Q8IVD9 AC011270.2-201ENST00000624293 2550 ntBASIC16.99■□□□□ 0.31
NUDCD3Q8IVD9 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC16.99■□□□□ 0.31
NUDCD3Q8IVD9 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC16.99■□□□□ 0.31
NUDCD3Q8IVD9 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
NUDCD3Q8IVD9 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
NUDCD3Q8IVD9 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
NUDCD3Q8IVD9 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC16.99■□□□□ 0.31
NUDCD3Q8IVD9 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
NUDCD3Q8IVD9 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
NUDCD3Q8IVD9 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
NUDCD3Q8IVD9 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
NUDCD3Q8IVD9 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
NUDCD3Q8IVD9 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
NUDCD3Q8IVD9 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
NUDCD3Q8IVD9 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
NUDCD3Q8IVD9 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
NUDCD3Q8IVD9 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
NUDCD3Q8IVD9 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
NUDCD3Q8IVD9 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC16.99■□□□□ 0.31
NUDCD3Q8IVD9 AC103564.2-201ENST00000432853 1299 ntBASIC16.99■□□□□ 0.31
NUDCD3Q8IVD9 ATP5G1P1-201ENST00000448724 379 ntBASIC16.99■□□□□ 0.31
NUDCD3Q8IVD9 GXYLT1P3-201ENST00000453058 1193 ntBASIC16.99■□□□□ 0.31
NUDCD3Q8IVD9 AC122714.2-201ENST00000502787 707 ntBASIC16.99■□□□□ 0.31
NUDCD3Q8IVD9 DUT-205ENST00000558813 769 ntTSL 2 BASIC16.99■□□□□ 0.31
NUDCD3Q8IVD9 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC16.99■□□□□ 0.31
NUDCD3Q8IVD9 AL390719.2-201ENST00000606993 987 ntBASIC16.99■□□□□ 0.31
NUDCD3Q8IVD9 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
NUDCD3Q8IVD9 AC022188.1-201ENST00000620960 1664 ntBASIC16.99■□□□□ 0.31
NUDCD3Q8IVD9 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC16.99■□□□□ 0.31
NUDCD3Q8IVD9 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
NUDCD3Q8IVD9 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC16.99■□□□□ 0.31
NUDCD3Q8IVD9 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC16.99■□□□□ 0.31
NUDCD3Q8IVD9 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC16.99■□□□□ 0.31
NUDCD3Q8IVD9 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC16.99■□□□□ 0.31
NUDCD3Q8IVD9 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
NUDCD3Q8IVD9 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
NUDCD3Q8IVD9 AC132872.4-202ENST00000622924 2756 ntBASIC16.99■□□□□ 0.31
NUDCD3Q8IVD9 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC16.99■□□□□ 0.31
NUDCD3Q8IVD9 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC16.99■□□□□ 0.31
NUDCD3Q8IVD9 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC16.99■□□□□ 0.31
NUDCD3Q8IVD9 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
NUDCD3Q8IVD9 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC16.98■□□□□ 0.31
NUDCD3Q8IVD9 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
NUDCD3Q8IVD9 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
NUDCD3Q8IVD9 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
NUDCD3Q8IVD9 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
NUDCD3Q8IVD9 AL135999.2-201ENST00000622438 1686 ntBASIC16.98■□□□□ 0.31
NUDCD3Q8IVD9 KRT8P10-201ENST00000450021 1447 ntBASIC16.98■□□□□ 0.31
NUDCD3Q8IVD9 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
NUDCD3Q8IVD9 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
NUDCD3Q8IVD9 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC16.98■□□□□ 0.31
NUDCD3Q8IVD9 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
NUDCD3Q8IVD9 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
NUDCD3Q8IVD9 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
NUDCD3Q8IVD9 SNX5-210ENST00000481323 562 ntTSL 3 BASIC16.98■□□□□ 0.31
NUDCD3Q8IVD9 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
NUDCD3Q8IVD9 AP002490.2-201ENST00000524791 560 ntBASIC16.98■□□□□ 0.31
NUDCD3Q8IVD9 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC16.98■□□□□ 0.31
NUDCD3Q8IVD9 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC16.98■□□□□ 0.31
NUDCD3Q8IVD9 STK25P1-201ENST00000585406 838 ntBASIC16.98■□□□□ 0.31
NUDCD3Q8IVD9 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC16.98■□□□□ 0.31
NUDCD3Q8IVD9 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC16.98■□□□□ 0.31
NUDCD3Q8IVD9 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC16.98■□□□□ 0.31
NUDCD3Q8IVD9 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC16.98■□□□□ 0.31
NUDCD3Q8IVD9 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
NUDCD3Q8IVD9 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
NUDCD3Q8IVD9 AL391256.1-201ENST00000443260 1855 ntBASIC16.98■□□□□ 0.31
NUDCD3Q8IVD9 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
NUDCD3Q8IVD9 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
NUDCD3Q8IVD9 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
NUDCD3Q8IVD9 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
NUDCD3Q8IVD9 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
NUDCD3Q8IVD9 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
NUDCD3Q8IVD9 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
NUDCD3Q8IVD9 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
NUDCD3Q8IVD9 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC16.98■□□□□ 0.31
NUDCD3Q8IVD9 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC16.98■□□□□ 0.31
NUDCD3Q8IVD9 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
NUDCD3Q8IVD9 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC16.97■□□□□ 0.31
NUDCD3Q8IVD9 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
NUDCD3Q8IVD9 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
NUDCD3Q8IVD9 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
NUDCD3Q8IVD9 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC16.97■□□□□ 0.31
NUDCD3Q8IVD9 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
NUDCD3Q8IVD9 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
NUDCD3Q8IVD9 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
NUDCD3Q8IVD9 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
NUDCD3Q8IVD9 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC16.97■□□□□ 0.31
NUDCD3Q8IVD9 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
NUDCD3Q8IVD9 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
NUDCD3Q8IVD9 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
NUDCD3Q8IVD9 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC16.97■□□□□ 0.31
NUDCD3Q8IVD9 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
NUDCD3Q8IVD9 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC16.97■□□□□ 0.31
NUDCD3Q8IVD9 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
NUDCD3Q8IVD9 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
NUDCD3Q8IVD9 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
NUDCD3Q8IVD9 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
NUDCD3Q8IVD9 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms