Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
RNF135Q8IUD6 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RNF135Q8IUD6 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RNF135Q8IUD6 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC18.1■□□□□ 0.49
RNF135Q8IUD6 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
RNF135Q8IUD6 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
RNF135Q8IUD6 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC18.1■□□□□ 0.49
RNF135Q8IUD6 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC18.1■□□□□ 0.49
RNF135Q8IUD6 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
RNF135Q8IUD6 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RNF135Q8IUD6 AC009949.1-201ENST00000623048 1830 ntBASIC18.1■□□□□ 0.49
RNF135Q8IUD6 AC132938.5-201ENST00000624980 1813 ntBASIC18.1■□□□□ 0.49
RNF135Q8IUD6 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC18.1■□□□□ 0.49
RNF135Q8IUD6 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
RNF135Q8IUD6 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
RNF135Q8IUD6 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
RNF135Q8IUD6 AL353593.2-201ENST00000602529 1483 ntBASIC18.1■□□□□ 0.49
RNF135Q8IUD6 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RNF135Q8IUD6 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
RNF135Q8IUD6 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
RNF135Q8IUD6 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RNF135Q8IUD6 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
RNF135Q8IUD6 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RNF135Q8IUD6 NABP1-203ENST00000409510 843 ntTSL 5 BASIC18.1■□□□□ 0.49
RNF135Q8IUD6 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC18.1■□□□□ 0.49
RNF135Q8IUD6 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC18.1■□□□□ 0.49
RNF135Q8IUD6 HNRNPA1P40-201ENST00000426371 1278 ntBASIC18.1■□□□□ 0.49
RNF135Q8IUD6 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC18.1■□□□□ 0.49
RNF135Q8IUD6 SIGLEC30P-201ENST00000455569 941 ntBASIC18.1■□□□□ 0.49
RNF135Q8IUD6 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
RNF135Q8IUD6 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
RNF135Q8IUD6 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
RNF135Q8IUD6 VPS29-207ENST00000549970 818 ntTSL 3 BASIC18.1■□□□□ 0.49
RNF135Q8IUD6 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC18.1■□□□□ 0.49
RNF135Q8IUD6 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC18.1■□□□□ 0.49
RNF135Q8IUD6 CECR7-204ENST00000609932 568 ntTSL 2 BASIC18.1■□□□□ 0.49
RNF135Q8IUD6 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
RNF135Q8IUD6 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RNF135Q8IUD6 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
RNF135Q8IUD6 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC18.1■□□□□ 0.49
RNF135Q8IUD6 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC18.1■□□□□ 0.49
RNF135Q8IUD6 AC012317.2-201ENST00000623305 2251 ntBASIC18.1■□□□□ 0.49
RNF135Q8IUD6 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
RNF135Q8IUD6 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC18.09■□□□□ 0.49
RNF135Q8IUD6 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
RNF135Q8IUD6 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RNF135Q8IUD6 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RNF135Q8IUD6 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RNF135Q8IUD6 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RNF135Q8IUD6 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
RNF135Q8IUD6 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RNF135Q8IUD6 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
RNF135Q8IUD6 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
RNF135Q8IUD6 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC18.09■□□□□ 0.49
RNF135Q8IUD6 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
RNF135Q8IUD6 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RNF135Q8IUD6 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
RNF135Q8IUD6 AL627223.1-201ENST00000416693 442 ntBASIC18.09■□□□□ 0.49
RNF135Q8IUD6 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC18.09■□□□□ 0.49
RNF135Q8IUD6 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC18.09■□□□□ 0.49
RNF135Q8IUD6 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
RNF135Q8IUD6 MEIS3P1-201ENST00000495167 958 ntBASIC18.09■□□□□ 0.49
RNF135Q8IUD6 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC18.09■□□□□ 0.49
RNF135Q8IUD6 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC18.09■□□□□ 0.49
RNF135Q8IUD6 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC18.09■□□□□ 0.49
RNF135Q8IUD6 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC18.09■□□□□ 0.49
RNF135Q8IUD6 MED16-214ENST00000617672 554 ntTSL 5 BASIC18.09■□□□□ 0.49
RNF135Q8IUD6 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RNF135Q8IUD6 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RNF135Q8IUD6 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
RNF135Q8IUD6 SIRPAP1-201ENST00000448467 1770 ntBASIC18.09■□□□□ 0.49
RNF135Q8IUD6 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RNF135Q8IUD6 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
RNF135Q8IUD6 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RNF135Q8IUD6 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
RNF135Q8IUD6 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RNF135Q8IUD6 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
RNF135Q8IUD6 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
RNF135Q8IUD6 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
RNF135Q8IUD6 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC18.08■□□□□ 0.49
RNF135Q8IUD6 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
RNF135Q8IUD6 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
RNF135Q8IUD6 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.49
RNF135Q8IUD6 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
RNF135Q8IUD6 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
RNF135Q8IUD6 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
RNF135Q8IUD6 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
RNF135Q8IUD6 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
RNF135Q8IUD6 AP002414.1-201ENST00000391405 1147 ntBASIC18.08■□□□□ 0.48
RNF135Q8IUD6 COX5BP2-201ENST00000392354 334 ntBASIC18.08■□□□□ 0.48
RNF135Q8IUD6 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC18.08■□□□□ 0.48
RNF135Q8IUD6 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC18.08■□□□□ 0.48
RNF135Q8IUD6 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC18.08■□□□□ 0.48
RNF135Q8IUD6 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
RNF135Q8IUD6 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC18.08■□□□□ 0.48
RNF135Q8IUD6 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
RNF135Q8IUD6 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
RNF135Q8IUD6 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC18.08■□□□□ 0.48
RNF135Q8IUD6 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
RNF135Q8IUD6 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms