Protein–RNA interactions for Protein: Q86Y07

VRK2, Serine/threonine-protein kinase VRK2, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2Q86Y07 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
VRK2Q86Y07 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC15.78■□□□□ 0.12
VRK2Q86Y07 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
VRK2Q86Y07 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
VRK2Q86Y07 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
VRK2Q86Y07 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
VRK2Q86Y07 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
VRK2Q86Y07 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
VRK2Q86Y07 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC15.78■□□□□ 0.12
VRK2Q86Y07 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC15.78■□□□□ 0.12
VRK2Q86Y07 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC15.78■□□□□ 0.12
VRK2Q86Y07 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
VRK2Q86Y07 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
VRK2Q86Y07 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC15.78■□□□□ 0.12
VRK2Q86Y07 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC15.78■□□□□ 0.12
VRK2Q86Y07 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
VRK2Q86Y07 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC15.78■□□□□ 0.12
VRK2Q86Y07 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
VRK2Q86Y07 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC15.78■□□□□ 0.12
VRK2Q86Y07 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
VRK2Q86Y07 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
VRK2Q86Y07 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
VRK2Q86Y07 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
VRK2Q86Y07 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC15.78■□□□□ 0.12
VRK2Q86Y07 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC15.78■□□□□ 0.12
VRK2Q86Y07 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC15.78■□□□□ 0.12
VRK2Q86Y07 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
VRK2Q86Y07 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC15.78■□□□□ 0.12
VRK2Q86Y07 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
VRK2Q86Y07 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
VRK2Q86Y07 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
VRK2Q86Y07 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC15.78■□□□□ 0.12
VRK2Q86Y07 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
VRK2Q86Y07 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
VRK2Q86Y07 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
VRK2Q86Y07 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC15.78■□□□□ 0.12
VRK2Q86Y07 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
VRK2Q86Y07 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
VRK2Q86Y07 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
VRK2Q86Y07 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
VRK2Q86Y07 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
VRK2Q86Y07 GID4-202ENST00000376345 1391 ntTSL 3 BASIC15.77■□□□□ 0.12
VRK2Q86Y07 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC15.77■□□□□ 0.12
VRK2Q86Y07 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
VRK2Q86Y07 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
VRK2Q86Y07 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
VRK2Q86Y07 HNRNPRP1-201ENST00000453465 1695 ntBASIC15.77■□□□□ 0.12
VRK2Q86Y07 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
VRK2Q86Y07 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
VRK2Q86Y07 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
VRK2Q86Y07 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC15.77■□□□□ 0.12
VRK2Q86Y07 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
VRK2Q86Y07 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
VRK2Q86Y07 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC15.77■□□□□ 0.12
VRK2Q86Y07 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC15.77■□□□□ 0.12
VRK2Q86Y07 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
VRK2Q86Y07 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC15.77■□□□□ 0.11
VRK2Q86Y07 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.11
VRK2Q86Y07 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
VRK2Q86Y07 AL645728.1-201ENST00000366221 2101 ntBASIC15.77■□□□□ 0.11
VRK2Q86Y07 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC15.77■□□□□ 0.11
VRK2Q86Y07 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC15.77■□□□□ 0.11
VRK2Q86Y07 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
VRK2Q86Y07 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC15.77■□□□□ 0.11
VRK2Q86Y07 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
VRK2Q86Y07 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.11
VRK2Q86Y07 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
VRK2Q86Y07 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
VRK2Q86Y07 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
VRK2Q86Y07 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
VRK2Q86Y07 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC15.76■□□□□ 0.11
VRK2Q86Y07 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
VRK2Q86Y07 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
VRK2Q86Y07 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
VRK2Q86Y07 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
VRK2Q86Y07 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
VRK2Q86Y07 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
VRK2Q86Y07 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
VRK2Q86Y07 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC15.76■□□□□ 0.11
VRK2Q86Y07 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC15.76■□□□□ 0.11
VRK2Q86Y07 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
VRK2Q86Y07 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
VRK2Q86Y07 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
VRK2Q86Y07 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC15.76■□□□□ 0.11
VRK2Q86Y07 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC15.76■□□□□ 0.11
VRK2Q86Y07 EMD-201ENST00000369835 966 ntTSL 3 BASIC15.76■□□□□ 0.11
VRK2Q86Y07 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
VRK2Q86Y07 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
VRK2Q86Y07 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC15.76■□□□□ 0.11
VRK2Q86Y07 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
VRK2Q86Y07 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC15.76■□□□□ 0.11
VRK2Q86Y07 HCG4P8-203ENST00000443049 980 ntBASIC15.76■□□□□ 0.11
VRK2Q86Y07 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC15.76■□□□□ 0.11
VRK2Q86Y07 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC15.76■□□□□ 0.11
VRK2Q86Y07 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC15.76■□□□□ 0.11
VRK2Q86Y07 NKAPP1-205ENST00000585790 367 ntBASIC15.76■□□□□ 0.11
VRK2Q86Y07 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
VRK2Q86Y07 AC064862.7-201ENST00000604520 867 ntBASIC15.76■□□□□ 0.11
VRK2Q86Y07 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
VRK2Q86Y07 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms