Protein–RNA interactions for Protein: Q7Z407

CSMD3, CUB and sushi domain-containing protein 3, humanhuman

Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3Q7Z407 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
CSMD3Q7Z407 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC11.71□□□□□ -0.53
CSMD3Q7Z407 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC11.71□□□□□ -0.53
CSMD3Q7Z407 CD276-203ENST00000537340 2439 ntTSL 2 BASIC11.71□□□□□ -0.53
CSMD3Q7Z407 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.53
CSMD3Q7Z407 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC11.71□□□□□ -0.53
CSMD3Q7Z407 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
CSMD3Q7Z407 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC11.71□□□□□ -0.53
CSMD3Q7Z407 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
CSMD3Q7Z407 ELK1P1-201ENST00000485699 580 ntBASIC11.71□□□□□ -0.53
CSMD3Q7Z407 IGHV3-62-201ENST00000520057 340 ntBASIC11.71□□□□□ -0.53
CSMD3Q7Z407 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.53
CSMD3Q7Z407 RARRES2P9-201ENST00000565168 469 ntBASIC11.71□□□□□ -0.53
CSMD3Q7Z407 AC008738.7-201ENST00000609744 511 ntBASIC11.71□□□□□ -0.53
CSMD3Q7Z407 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC11.71□□□□□ -0.53
CSMD3Q7Z407 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.53
CSMD3Q7Z407 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC11.71□□□□□ -0.54
CSMD3Q7Z407 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
CSMD3Q7Z407 AC009113.1-201ENST00000570267 2443 ntBASIC11.71□□□□□ -0.54
CSMD3Q7Z407 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
CSMD3Q7Z407 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
CSMD3Q7Z407 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC11.71□□□□□ -0.54
CSMD3Q7Z407 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC11.71□□□□□ -0.54
CSMD3Q7Z407 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.54
CSMD3Q7Z407 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC11.71□□□□□ -0.54
CSMD3Q7Z407 MXI1-205ENST00000393134 889 ntTSL 2 BASIC11.71□□□□□ -0.54
CSMD3Q7Z407 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC11.71□□□□□ -0.54
CSMD3Q7Z407 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
CSMD3Q7Z407 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC11.71□□□□□ -0.54
CSMD3Q7Z407 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC11.71□□□□□ -0.54
CSMD3Q7Z407 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.54
CSMD3Q7Z407 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.54
CSMD3Q7Z407 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC11.71□□□□□ -0.54
CSMD3Q7Z407 AL109936.8-201ENST00000641772 604 ntBASIC11.71□□□□□ -0.54
CSMD3Q7Z407 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
CSMD3Q7Z407 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC11.71□□□□□ -0.54
CSMD3Q7Z407 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC11.71□□□□□ -0.54
CSMD3Q7Z407 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC11.71□□□□□ -0.54
CSMD3Q7Z407 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
CSMD3Q7Z407 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC11.71□□□□□ -0.54
CSMD3Q7Z407 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC11.7□□□□□ -0.54
CSMD3Q7Z407 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC11.7□□□□□ -0.54
CSMD3Q7Z407 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
CSMD3Q7Z407 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC11.7□□□□□ -0.54
CSMD3Q7Z407 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
CSMD3Q7Z407 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
CSMD3Q7Z407 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
CSMD3Q7Z407 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
CSMD3Q7Z407 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
CSMD3Q7Z407 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
CSMD3Q7Z407 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
CSMD3Q7Z407 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC11.7□□□□□ -0.54
CSMD3Q7Z407 AC078852.2-201ENST00000504748 527 ntTSL 5 BASIC11.7□□□□□ -0.54
CSMD3Q7Z407 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC11.7□□□□□ -0.54
CSMD3Q7Z407 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC11.7□□□□□ -0.54
CSMD3Q7Z407 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC11.7□□□□□ -0.54
CSMD3Q7Z407 AL844908.2-201ENST00000609461 460 ntBASIC11.7□□□□□ -0.54
CSMD3Q7Z407 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
CSMD3Q7Z407 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
CSMD3Q7Z407 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC11.7□□□□□ -0.54
CSMD3Q7Z407 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
CSMD3Q7Z407 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
CSMD3Q7Z407 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC11.7□□□□□ -0.54
CSMD3Q7Z407 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
CSMD3Q7Z407 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
CSMD3Q7Z407 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
CSMD3Q7Z407 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
CSMD3Q7Z407 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC11.7□□□□□ -0.54
CSMD3Q7Z407 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
CSMD3Q7Z407 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
CSMD3Q7Z407 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
CSMD3Q7Z407 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
CSMD3Q7Z407 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC11.7□□□□□ -0.54
CSMD3Q7Z407 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC11.7□□□□□ -0.54
CSMD3Q7Z407 BNIP3P42-201ENST00000454982 569 ntBASIC11.7□□□□□ -0.54
CSMD3Q7Z407 AL583810.1-201ENST00000553344 1045 ntBASIC11.7□□□□□ -0.54
CSMD3Q7Z407 WASH4P-201ENST00000564273 1246 ntBASIC11.7□□□□□ -0.54
CSMD3Q7Z407 BNIP3P29-201ENST00000598302 571 ntBASIC11.7□□□□□ -0.54
CSMD3Q7Z407 AC011447.5-201ENST00000616168 564 ntBASIC11.7□□□□□ -0.54
CSMD3Q7Z407 AC073592.8-201ENST00000624126 511 ntBASIC11.7□□□□□ -0.54
CSMD3Q7Z407 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC11.7□□□□□ -0.54
CSMD3Q7Z407 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
CSMD3Q7Z407 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
CSMD3Q7Z407 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
CSMD3Q7Z407 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
CSMD3Q7Z407 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
CSMD3Q7Z407 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
CSMD3Q7Z407 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC11.7□□□□□ -0.54
CSMD3Q7Z407 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
CSMD3Q7Z407 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC11.7□□□□□ -0.54
CSMD3Q7Z407 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
CSMD3Q7Z407 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
CSMD3Q7Z407 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
CSMD3Q7Z407 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC11.7□□□□□ -0.54
CSMD3Q7Z407 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
CSMD3Q7Z407 MPV17-208ENST00000405076 603 ntTSL 5 BASIC11.7□□□□□ -0.54
CSMD3Q7Z407 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
CSMD3Q7Z407 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC11.7□□□□□ -0.54
CSMD3Q7Z407 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC11.7□□□□□ -0.54
CSMD3Q7Z407 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC11.7□□□□□ -0.54
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms